Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AK6P2-201ENST00000549020 471 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 AC027288.2-201ENST00000553028 243 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.1□□□□□ -2.23
CSNK1A1P48729 AC015688.6-201ENST00000577737 104 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 MIR5696-201ENST00000578474 85 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.1□□□□□ -2.23
CSNK1A1P48729 AP003465.2-201ENST00000602571 373 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 AC124303.1-201ENST00000605703 360 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 AL355802.3-201ENST00000607571 545 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 AL078604.3-201ENST00000615580 211 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
CSNK1A1P48729 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.1□□□□□ -2.23
CSNK1A1P48729 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.1□□□□□ -2.23
CSNK1A1P48729 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.1□□□□□ -2.23
CSNK1A1P48729 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.1□□□□□ -2.23
CSNK1A1P48729 MTND5P35-201ENST00000557537 1720 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 Y_RNA.89-201ENST00000363031 102 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 RNU6-245P-201ENST00000384020 107 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 Y_RNA.516-201ENST00000384541 124 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 RNU6-831P-201ENST00000384548 107 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 RNU6-306P-201ENST00000384617 107 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 RNU6-373P-201ENST00000411247 98 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AP1B1P2-201ENST00000416196 106 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.09□□□□□ -2.23
CSNK1A1P48729 AL445305.1-201ENST00000432577 575 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.09□□□□□ -2.23
CSNK1A1P48729 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.09□□□□□ -2.23
CSNK1A1P48729 RPS29P25-201ENST00000481709 171 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.09□□□□□ -2.23
CSNK1A1P48729 ACA59.1-201ENST00000515966 143 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 RNU6-864P-201ENST00000516256 108 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 RNU6-1088P-201ENST00000516850 104 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 RNU6-1314P-201ENST00000517139 104 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AC025647.1-201ENST00000517879 253 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.09□□□□□ -2.23
CSNK1A1P48729 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.09□□□□□ -2.23
CSNK1A1P48729 MIR4769-201ENST00000584126 77 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AC009033.1-201ENST00000624279 431 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AL359757.2-201ENST00000624309 274 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 AL078596.1-201ENST00000624856 447 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 snoZ196.1-201ENST00000625269 89 ntBASIC1.09□□□□□ -2.23
CSNK1A1P48729 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.08□□□□□ -2.24
CSNK1A1P48729 RNU4-40P-201ENST00000364351 143 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 SNORD87-201ENST00000364849 89 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 RNU6-534P-201ENST00000364877 106 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 RNU6-331P-201ENST00000384724 107 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 MIR153-2-201ENST00000385225 87 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.08□□□□□ -2.24
CSNK1A1P48729 RPL37P10-201ENST00000412884 288 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 RPS29P29-201ENST00000456396 171 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 snoU13.27-201ENST00000459278 104 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 RNU6-221P-201ENST00000459541 99 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 RNA5SP458-201ENST00000516188 119 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 SNORA25.14-201ENST00000516481 132 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.08□□□□□ -2.24
CSNK1A1P48729 AC090821.2-201ENST00000523552 176 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.08□□□□□ -2.24
CSNK1A1P48729 MIR3937-201ENST00000580135 106 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 AC012557.2-201ENST00000605919 418 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 SNORD11B-201ENST00000607707 90 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 AC097065.2-201ENST00000608159 533 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 AC009248.2-201ENST00000619826 254 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 U6.108-201ENST00000637764 58 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 AC100810.6-201ENST00000638068 285 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 MTND4P12-201ENST00000498999 1377 ntBASIC1.08□□□□□ -2.24
CSNK1A1P48729 RNU6-873P-201ENST00000363833 107 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 Y_RNA.319-201ENST00000365138 92 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 RNU4-12P-201ENST00000365233 139 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 SNORD116-4-201ENST00000384733 96 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 RNU6-159P-201ENST00000391080 106 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 MRPL35P1-201ENST00000404272 572 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 AC243428.1-201ENST00000421099 264 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 MTATP6P13-201ENST00000438531 667 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 AC074290.1-201ENST00000448883 135 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.07□□□□□ -2.24
CSNK1A1P48729 AL163195.1-201ENST00000496941 348 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 RNU6-1146P-201ENST00000516282 102 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 RNU6-1198P-201ENST00000516904 67 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 RNU6-273P-201ENST00000516937 96 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 UBL5P4-201ENST00000562584 236 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.07□□□□□ -2.24
CSNK1A1P48729 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.07□□□□□ -2.24
CSNK1A1P48729 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.07□□□□□ -2.24
CSNK1A1P48729 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
CSNK1A1P48729 RNU6-137P-201ENST00000363680 108 ntBASIC1.06□□□□□ -2.24
CSNK1A1P48729 SNORA72.2-201ENST00000365028 127 ntBASIC1.06□□□□□ -2.24
CSNK1A1P48729 Y_RNA.533-201ENST00000384596 114 ntBASIC1.06□□□□□ -2.24
CSNK1A1P48729 RNA5SP109-201ENST00000391010 116 ntBASIC1.06□□□□□ -2.24
CSNK1A1P48729 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CSNK1A1P48729 MIR1253-201ENST00000408273 105 ntBASIC1.06□□□□□ -2.24
CSNK1A1P48729 AC004965.1-201ENST00000413033 213 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms