Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AC024995.1-201ENST00000523014 93 ntBASIC1.96□□□□□ -2.1
RXRGP48443 CBX3P8-201ENST00000532412 525 ntBASIC1.96□□□□□ -2.1
RXRGP48443 UBL5P4-201ENST00000562584 236 ntBASIC1.96□□□□□ -2.1
RXRGP48443 AC090617.3-201ENST00000573670 475 ntBASIC1.96□□□□□ -2.1
RXRGP48443 AL355802.3-201ENST00000607571 545 ntBASIC1.96□□□□□ -2.1
RXRGP48443 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
RXRGP48443 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RXRGP48443 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.95□□□□□ -2.1
RXRGP48443 Y_RNA.48-201ENST00000362710 103 ntBASIC1.95□□□□□ -2.1
RXRGP48443 Y_RNA.248-201ENST00000364501 109 ntBASIC1.95□□□□□ -2.1
RXRGP48443 RNU6-296P-201ENST00000384608 107 ntBASIC1.95□□□□□ -2.1
RXRGP48443 MTND3P23-201ENST00000431980 347 ntBASIC1.95□□□□□ -2.1
RXRGP48443 AC093303.1-201ENST00000514549 295 ntBASIC1.95□□□□□ -2.1
RXRGP48443 Y_RNA.683-201ENST00000516508 93 ntBASIC1.95□□□□□ -2.1
RXRGP48443 RNU7-30P-201ENST00000516835 62 ntBASIC1.95□□□□□ -2.1
RXRGP48443 CYCSP23-201ENST00000519781 313 ntBASIC1.95□□□□□ -2.1
RXRGP48443 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.95□□□□□ -2.1
RXRGP48443 APOOP3-201ENST00000536787 586 ntBASIC1.95□□□□□ -2.1
RXRGP48443 AC110588.1-201ENST00000559699 137 ntBASIC1.95□□□□□ -2.1
RXRGP48443 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.95□□□□□ -2.1
RXRGP48443 AL133216.2-202ENST00000634512 349 ntBASIC1.95□□□□□ -2.1
RXRGP48443 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RXRGP48443 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RXRGP48443 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RXRGP48443 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RXRGP48443 RNU6-950P-201ENST00000384651 107 ntBASIC1.94□□□□□ -2.1
RXRGP48443 RNU6-417P-201ENST00000384712 107 ntBASIC1.94□□□□□ -2.1
RXRGP48443 AL117342.1-201ENST00000404861 406 ntBASIC1.94□□□□□ -2.1
RXRGP48443 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
RXRGP48443 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.94□□□□□ -2.1
RXRGP48443 RPL31P63-201ENST00000422565 375 ntBASIC1.94□□□□□ -2.1
RXRGP48443 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.94□□□□□ -2.1
RXRGP48443 RNU7-87P-201ENST00000459343 62 ntBASIC1.94□□□□□ -2.1
RXRGP48443 RPL23AP63-201ENST00000498752 471 ntBASIC1.94□□□□□ -2.1
RXRGP48443 RNU6-107P-201ENST00000516643 102 ntBASIC1.94□□□□□ -2.1
RXRGP48443 RNU1-142P-201ENST00000516682 145 ntBASIC1.94□□□□□ -2.1
RXRGP48443 AC025647.1-201ENST00000517879 253 ntBASIC1.94□□□□□ -2.1
RXRGP48443 AP000942.3-201ENST00000603702 160 ntBASIC1.94□□□□□ -2.1
RXRGP48443 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RXRGP48443 RNU1-17P-201ENST00000363022 152 ntBASIC1.93□□□□□ -2.1
RXRGP48443 RNY1P16-201ENST00000363063 111 ntBASIC1.93□□□□□ -2.1
RXRGP48443 Y_RNA.184-201ENST00000363884 108 ntBASIC1.93□□□□□ -2.1
RXRGP48443 SNORA40.18-201ENST00000391200 128 ntBASIC1.93□□□□□ -2.1
RXRGP48443 RNU1-139P-201ENST00000391307 165 ntBASIC1.93□□□□□ -2.1
RXRGP48443 MIR190B-201ENST00000401119 79 ntBASIC1.93□□□□□ -2.1
RXRGP48443 AC245047.4-201ENST00000433189 144 ntBASIC1.93□□□□□ -2.1
RXRGP48443 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.93□□□□□ -2.1
RXRGP48443 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.93□□□□□ -2.1
RXRGP48443 AC091179.3-201ENST00000474761 144 ntBASIC1.93□□□□□ -2.1
RXRGP48443 AC103851.1-201ENST00000506833 274 ntBASIC1.93□□□□□ -2.1
RXRGP48443 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RXRGP48443 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.93□□□□□ -2.1
RXRGP48443 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
RXRGP48443 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
RXRGP48443 AC009229.3-201ENST00000608056 282 ntBASIC1.93□□□□□ -2.1
RXRGP48443 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.93□□□□□ -2.1
RXRGP48443 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.93□□□□□ -2.1
RXRGP48443 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.93□□□□□ -2.1
RXRGP48443 MTND5P16-201ENST00000460269 1703 ntBASIC1.92□□□□□ -2.1
RXRGP48443 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RXRGP48443 MIR424-201ENST00000362227 98 ntBASIC1.92□□□□□ -2.1
RXRGP48443 RNU6-845P-201ENST00000362578 103 ntBASIC1.92□□□□□ -2.1
RXRGP48443 SNORD87-201ENST00000364849 89 ntBASIC1.92□□□□□ -2.1
RXRGP48443 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.92□□□□□ -2.1
RXRGP48443 Y_RNA.415-201ENST00000384012 112 ntBASIC1.92□□□□□ -2.1
RXRGP48443 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
RXRGP48443 MIR10B-201ENST00000385011 110 ntBASIC1.92□□□□□ -2.1
RXRGP48443 MIR548B-201ENST00000385247 97 ntBASIC1.92□□□□□ -2.1
RXRGP48443 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RXRGP48443 RNA5SP213-201ENST00000391031 106 ntBASIC1.92□□□□□ -2.1
RXRGP48443 MIR1185-2-201ENST00000408687 86 ntBASIC1.92□□□□□ -2.1
RXRGP48443 MTND1P2-201ENST00000430604 821 ntBASIC1.92□□□□□ -2.1
RXRGP48443 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.92□□□□□ -2.1
RXRGP48443 Y_RNA.635-201ENST00000459041 101 ntBASIC1.92□□□□□ -2.1
RXRGP48443 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.92□□□□□ -2.1
RXRGP48443 AC093023.1-201ENST00000547375 507 ntBASIC1.92□□□□□ -2.1
RXRGP48443 AL137100.2-201ENST00000555786 315 ntBASIC1.92□□□□□ -2.1
RXRGP48443 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
RXRGP48443 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.92□□□□□ -2.1
RXRGP48443 AL359075.3-201ENST00000613288 217 ntBASIC1.92□□□□□ -2.1
RXRGP48443 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RXRGP48443 MTND5P35-201ENST00000557537 1720 ntBASIC1.91□□□□□ -2.1
RXRGP48443 Y_RNA.106-201ENST00000363189 100 ntBASIC1.91□□□□□ -2.1
RXRGP48443 SNORA63D-201ENST00000364359 132 ntBASIC1.91□□□□□ -2.1
RXRGP48443 Y_RNA.364-201ENST00000365532 101 ntBASIC1.91□□□□□ -2.1
RXRGP48443 Y_RNA.595-201ENST00000410403 105 ntBASIC1.91□□□□□ -2.1
RXRGP48443 Y_RNA.599-201ENST00000410489 109 ntBASIC1.91□□□□□ -2.1
RXRGP48443 HSPE1P21-201ENST00000438283 308 ntBASIC1.91□□□□□ -2.1
RXRGP48443 snoU13.27-201ENST00000459278 104 ntBASIC1.91□□□□□ -2.1
RXRGP48443 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.91□□□□□ -2.1
RXRGP48443 Y_RNA.670-201ENST00000516255 105 ntBASIC1.91□□□□□ -2.1
RXRGP48443 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.91□□□□□ -2.1
RXRGP48443 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.91□□□□□ -2.1
RXRGP48443 Y_RNA.67-201ENST00000362870 100 ntBASIC1.9□□□□□ -2.11
RXRGP48443 Y_RNA.166-201ENST00000363730 102 ntBASIC1.9□□□□□ -2.11
RXRGP48443 RNU11-5P-201ENST00000391216 129 ntBASIC1.9□□□□□ -2.11
RXRGP48443 RNA5SP504-201ENST00000410676 117 ntBASIC1.9□□□□□ -2.11
RXRGP48443 AL445685.2-201ENST00000422551 342 ntBASIC1.9□□□□□ -2.11
RXRGP48443 TOMM22P2-201ENST00000430735 237 ntBASIC1.9□□□□□ -2.11
RXRGP48443 JTBP1-201ENST00000441314 247 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms