Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 U3.9-201ENST00000363823 204 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 RNU6-873P-201ENST00000363833 107 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 RNU4-56P-201ENST00000364700 142 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 SNORA64-201ENST00000384674 134 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 snosnR66.1-201ENST00000391095 99 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 RNA5SP338-201ENST00000410495 85 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 RNA5SP450-201ENST00000411206 102 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.98□□□□□ -2.09
SLC6A12P48065 AC114482.1-201ENST00000418010 247 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 AC096920.1-201ENST00000423991 241 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 U8.20-201ENST00000459445 131 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 HSPE1P18-201ENST00000517602 280 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 AC023442.1-201ENST00000531247 422 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.98□□□□□ -2.09
SLC6A12P48065 AL442163.3-201ENST00000554110 156 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 PART1_1.1-201ENST00000611761 217 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 MIR6715A-201ENST00000615929 79 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SLC6A12P48065 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SLC6A12P48065 ZNF204P-201ENST00000416749 2397 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 ZNF702P-202ENST00000434269 1966 ntBASIC1.98□□□□□ -2.09
SLC6A12P48065 Y_RNA.145-201ENST00000363527 102 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 Y_RNA.455-201ENST00000384230 98 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 RNY3P4-201ENST00000384428 101 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 MIR29C-201ENST00000385231 88 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 AL512604.1-201ENST00000404812 257 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 MIR548F4-201ENST00000408515 105 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 Y_RNA.597-201ENST00000410463 100 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 RNU6-1001P-201ENST00000411265 100 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC6A12P48065 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC6A12P48065 PRELID3BP1-201ENST00000457142 540 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 AC093852.1-201ENST00000503587 266 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 RNU6-764P-201ENST00000516396 105 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 RNU6-965P-201ENST00000516721 96 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 RNA5SP54-201ENST00000516951 92 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 AC022868.1-201ENST00000517767 391 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.97□□□□□ -2.09
SLC6A12P48065 AC040926.1-201ENST00000530195 238 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 HSBP1P1-201ENST00000555205 166 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 MIR5695-201ENST00000579717 85 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 AL138825.1-201ENST00000618587 192 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 AL078596.1-201ENST00000624856 447 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 U6.92-201ENST00000636464 89 ntBASIC1.97□□□□□ -2.09
SLC6A12P48065 AC008555.8-201ENST00000623602 2168 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
SLC6A12P48065 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SLC6A12P48065 Y_RNA.27-201ENST00000362540 103 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 RNA5SP276-201ENST00000362580 94 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 SNORD115-3-201ENST00000363100 82 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 MIR329-1-201ENST00000385028 80 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 MIR1262-201ENST00000408276 93 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 RNU2-2P-201ENST00000410396 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 RNU6-130P-201ENST00000411112 103 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.96□□□□□ -2.1
SLC6A12P48065 AC027124.2-201ENST00000428249 105 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 CBX3P6-201ENST00000430257 527 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 AC245102.2-201ENST00000448956 180 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 MTCO3P8-201ENST00000453691 755 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 AC010655.3-201ENST00000478818 450 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 Y_RNA.720-201ENST00000517166 92 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 MIR2355-201ENST00000517199 87 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 AC022616.4-201ENST00000522985 181 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 AC093023.1-201ENST00000547375 507 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 MIR3124-201ENST00000582636 67 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 AC136443.5-201ENST00000603741 370 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.15-201ENST00000611544 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.16-201ENST00000613119 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.12-201ENST00000613778 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.20-201ENST00000613956 192 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.96□□□□□ -2.1
SLC6A12P48065 AL357075.2-201ENST00000614906 189 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.9-201ENST00000615427 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.11-201ENST00000616345 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.2-201ENST00000616535 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.3-201ENST00000617785 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.19-201ENST00000618602 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 RNU2-1-201ENST00000618664 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.6-201ENST00000619225 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.5-201ENST00000619465 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 U2.10-201ENST00000620268 191 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 SDR42E1P4-201ENST00000620894 481 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
SLC6A12P48065 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.96□□□□□ -2.1
SLC6A12P48065 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.95□□□□□ -2.1
SLC6A12P48065 SNORD14.1-201ENST00000365609 90 ntBASIC1.95□□□□□ -2.1
SLC6A12P48065 SNORA18.2-201ENST00000383865 132 ntBASIC1.95□□□□□ -2.1
SLC6A12P48065 Y_RNA.389-201ENST00000383924 113 ntBASIC1.95□□□□□ -2.1
SLC6A12P48065 RNU6-26P-201ENST00000383985 107 ntBASIC1.95□□□□□ -2.1
SLC6A12P48065 RNU6-1145P-201ENST00000384246 107 ntBASIC1.95□□□□□ -2.1
SLC6A12P48065 SNORA67.3-201ENST00000384366 140 ntBASIC1.95□□□□□ -2.1
SLC6A12P48065 RNU6-541P-201ENST00000384709 110 ntBASIC1.95□□□□□ -2.1
SLC6A12P48065 RNA5SP504-201ENST00000410676 117 ntBASIC1.95□□□□□ -2.1
SLC6A12P48065 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SLC6A12P48065 AL358176.2-201ENST00000425769 204 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms