Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.9□□□□□ -2.26
BRCA1P38398 AL158063.1-201ENST00000615349 536 ntBASIC0.9□□□□□ -2.26
BRCA1P38398 AC009509.4-201ENST00000619202 509 ntBASIC0.9□□□□□ -2.26
BRCA1P38398 RNU6-280P-201ENST00000364145 104 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 RNU6-282P-201ENST00000365357 103 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 USP9YP14-201ENST00000430663 563 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.9□□□□□ -2.27
BRCA1P38398 AC098862.1-201ENST00000504991 413 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.9□□□□□ -2.27
BRCA1P38398 CENPUP1-201ENST00000526649 1202 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.9□□□□□ -2.27
BRCA1P38398 AC004492.1-201ENST00000607036 742 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 AC017083.3-201ENST00000609955 700 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 AC073534.2-201ENST00000620377 381 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 snoZ196.1-201ENST00000625269 89 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 SNORA43.4-201ENST00000629559 138 ntBASIC0.9□□□□□ -2.27
BRCA1P38398 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.9□□□□□ -2.27
BRCA1P38398 Y_RNA.1-201ENST00000352915 104 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 RNA5SP494-201ENST00000410653 129 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 RN7SKP142-201ENST00000411236 328 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.89□□□□□ -2.27
BRCA1P38398 TIMM9P3-201ENST00000428659 274 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.89□□□□□ -2.27
BRCA1P38398 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.89□□□□□ -2.27
BRCA1P38398 SNORA19.2-201ENST00000516013 114 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 AC060788.1-201ENST00000521318 469 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
BRCA1P38398 LRRC34P1-201ENST00000542742 915 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.89□□□□□ -2.27
BRCA1P38398 CYP3A52P-201ENST00000563326 91 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 RNU6-89P-201ENST00000606519 100 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 GHRLOS.1-201ENST00000610995 70 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 MIR8054-201ENST00000620877 86 ntBASIC0.89□□□□□ -2.27
BRCA1P38398 RNU1-76P-201ENST00000362903 159 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 RNU6-534P-201ENST00000364877 106 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 RNU6-1329P-201ENST00000365664 107 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 RNU6-1158P-201ENST00000391167 107 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
BRCA1P38398 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.88□□□□□ -2.27
BRCA1P38398 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.88□□□□□ -2.27
BRCA1P38398 AC016717.1-201ENST00000448918 286 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.88□□□□□ -2.27
BRCA1P38398 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.88□□□□□ -2.27
BRCA1P38398 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.88□□□□□ -2.27
BRCA1P38398 AC006362.1-201ENST00000567392 174 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 MIR5692C1-201ENST00000585309 91 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 AL513534.2-201ENST00000603836 250 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 ZNF204P-201ENST00000416749 2397 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 RNU6-1303P-201ENST00000364841 107 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 Y_RNA.287-201ENST00000364853 94 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 RNY3P9-201ENST00000384727 106 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 MIR549A-201ENST00000385268 96 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.88□□□□□ -2.27
BRCA1P38398 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.88□□□□□ -2.27
BRCA1P38398 AL357078.3-201ENST00000607528 618 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 AC078883.4-201ENST00000623218 367 ntBASIC0.88□□□□□ -2.27
BRCA1P38398 MIR302D-201ENST00000362275 68 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 RNU6-1123P-201ENST00000362347 106 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 RNA5SP323-201ENST00000391094 133 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 MRPL35P3-201ENST00000421557 364 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 AC010154.1-201ENST00000425857 269 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 AL031667.1-201ENST00000440222 725 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.87□□□□□ -2.27
BRCA1P38398 MTCO3P8-201ENST00000453691 755 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 MTCO2P18-201ENST00000457151 658 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 SNORA25.14-201ENST00000516481 132 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 RNU6-612P-201ENST00000516909 102 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 MIR5696-201ENST00000578474 85 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 MIR4424-201ENST00000585257 86 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 AC021506.2-201ENST00000612354 169 ntBASIC0.87□□□□□ -2.27
BRCA1P38398 Y_RNA.77-201ENST00000362962 107 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 Y_RNA.378-201ENST00000365652 113 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 AL590002.1-201ENST00000406554 418 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 AC092628.1-201ENST00000436250 252 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 HMGN2P34-201ENST00000437647 269 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 HSPE1P13-201ENST00000451143 297 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 AF186996.7-201ENST00000492781 209 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.86□□□□□ -2.27
BRCA1P38398 AC091874.1-201ENST00000511402 339 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 RNA5SP401-201ENST00000515920 127 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 Y_RNA.717-201ENST00000517106 92 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 AC104383.1-201ENST00000530297 370 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 RMST_3.1-201ENST00000611651 109 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
BRCA1P38398 Y_RNA.151-201ENST00000363566 112 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 SNORD113-7-201ENST00000363762 77 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 RNU5F-3P-201ENST00000363767 117 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
BRCA1P38398 SNORA36A-201ENST00000384221 132 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 MIR1185-2-201ENST00000408687 86 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 RNU6-1186P-201ENST00000410429 97 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.86□□□□□ -2.27
BRCA1P38398 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.86□□□□□ -2.27
BRCA1P38398 CETN4P-201ENST00000432407 469 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.86□□□□□ -2.27
BRCA1P38398 AC073415.1-201ENST00000449240 153 ntBASIC0.86□□□□□ -2.27
BRCA1P38398 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms