Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC025465.3-201ENST00000510570 311 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXD13P35453 Y_RNA.683-201ENST00000516508 93 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXD13P35453 AC005014.2-201ENST00000607795 599 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXD13P35453 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 AC084768.2-201ENST00000622736 221 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 TPTEP1-208ENST00000636884 213 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 AC099654.14-201ENST00000638599 341 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 MTND5P16-201ENST00000460269 1703 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 Y_RNA.184-201ENST00000363884 108 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 RNU6-296P-201ENST00000384608 107 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 MIR583-201ENST00000384846 75 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 SNORA75.4-201ENST00000391278 119 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 AL117342.1-201ENST00000404861 406 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 MIR1185-2-201ENST00000408687 86 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 RNA5SP504-201ENST00000410676 117 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 AL121890.1-201ENST00000435457 205 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 RNU7-87P-201ENST00000459343 62 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 snoU13.26-201ENST00000459452 105 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 AC008834.1-201ENST00000511612 175 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 AC025647.1-201ENST00000517879 253 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 MIR8074-201ENST00000615081 81 ntBASIC1.9□□□□□ -2.11
HOXD13P35453 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HOXD13P35453 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HOXD13P35453 MTND5P35-201ENST00000557537 1720 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 Y_RNA.415-201ENST00000384012 112 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 MIR548B-201ENST00000385247 97 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 AL353997.1-201ENST00000432936 108 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 AC007677.1-201ENST00000445757 515 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 RPL7P42-201ENST00000481005 679 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 HMGB3P17-201ENST00000504195 649 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 AC105029.1-201ENST00000520250 669 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 AC024995.1-201ENST00000523014 93 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXD13P35453 AC093023.1-201ENST00000547375 507 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXD13P35453 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXD13P35453 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 MIR5690-201ENST00000583739 73 ntBASIC1.89□□□□□ -2.11
HOXD13P35453 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXD13P35453 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HOXD13P35453 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
HOXD13P35453 SNORD87-201ENST00000364849 89 ntBASIC1.88□□□□□ -2.11
HOXD13P35453 SNORD81.2-201ENST00000365153 76 ntBASIC1.88□□□□□ -2.11
HOXD13P35453 RNU6-281P-201ENST00000384212 103 ntBASIC1.88□□□□□ -2.11
HOXD13P35453 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HOXD13P35453 RNU6-360P-201ENST00000390944 104 ntBASIC1.88□□□□□ -2.11
HOXD13P35453 RNA5SP323-201ENST00000391094 133 ntBASIC1.88□□□□□ -2.11
HOXD13P35453 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.88□□□□□ -2.11
HOXD13P35453 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
HOXD13P35453 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
HOXD13P35453 AC092794.2-201ENST00000620933 563 ntBASIC1.88□□□□□ -2.11
HOXD13P35453 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.87□□□□□ -2.11
HOXD13P35453 RNU6-417P-201ENST00000384712 107 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 Y_RNA.595-201ENST00000410403 105 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 AC138393.2-201ENST00000414742 246 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 PDCL2P1-201ENST00000419302 352 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 AC245047.4-201ENST00000433189 144 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXD13P35453 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXD13P35453 RPL17P19-201ENST00000489069 552 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXD13P35453 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXD13P35453 RNU6-107P-201ENST00000516643 102 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 SNORA20.3-201ENST00000516880 132 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 RNU6-264P-201ENST00000517134 104 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 APOOP3-201ENST00000536787 586 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXD13P35453 MIR4255-201ENST00000579351 72 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 MZT1P2-201ENST00000604387 248 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 AC025253.1-201ENST00000613623 543 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXD13P35453 AL669831.3-213ENST00000636676 183 ntBASIC1.87□□□□□ -2.11
HOXD13P35453 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HOXD13P35453 RNU6-222P-201ENST00000362438 107 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.86□□□□□ -2.11
HOXD13P35453 RNU6-331P-201ENST00000384724 107 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 SNORA26.9-201ENST00000391322 122 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 AL627390.1-201ENST00000396055 340 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 AC092423.1-201ENST00000430165 186 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 HSPE1P9-201ENST00000440046 311 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 AC027575.1-201ENST00000481064 460 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.86□□□□□ -2.11
HOXD13P35453 AC091144.1-201ENST00000519573 138 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 AC004584.2-201ENST00000570407 410 ntBASIC1.86□□□□□ -2.11
HOXD13P35453 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HOXD13P35453 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HOXD13P35453 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HOXD13P35453 SNORA63D-201ENST00000364359 132 ntBASIC1.85□□□□□ -2.11
HOXD13P35453 Y_RNA.404-201ENST00000383978 102 ntBASIC1.85□□□□□ -2.11
HOXD13P35453 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
HOXD13P35453 EIF1P2-201ENST00000428233 350 ntBASIC1.85□□□□□ -2.11
HOXD13P35453 TOMM22P2-201ENST00000430735 237 ntBASIC1.85□□□□□ -2.11
HOXD13P35453 RBMX2P4-201ENST00000441256 376 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms