Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIR3939-201ENST00000582614 106 ntBASIC3.77□□□□□ -1.81
GPC1P35052 MIR4765-201ENST00000585007 77 ntBASIC3.77□□□□□ -1.81
GPC1P35052 AC107294.3-201ENST00000609211 526 ntBASIC3.77□□□□□ -1.81
GPC1P35052 U6.73-201ENST00000619194 103 ntBASIC3.77□□□□□ -1.81
GPC1P35052 AL035470.1-201ENST00000622571 220 ntBASIC3.77□□□□□ -1.81
GPC1P35052 MIR6830-201ENST00000636015 70 ntBASIC3.77□□□□□ -1.81
GPC1P35052 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GPC1P35052 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
GPC1P35052 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.76□□□□□ -1.81
GPC1P35052 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
GPC1P35052 AP001486.2-201ENST00000561652 5113 ntBASIC3.76□□□□□ -1.81
GPC1P35052 RNA5SP295-201ENST00000362655 121 ntBASIC3.76□□□□□ -1.81
GPC1P35052 Y_RNA.49-201ENST00000362714 112 ntBASIC3.76□□□□□ -1.81
GPC1P35052 RNU6-1113P-201ENST00000384348 107 ntBASIC3.76□□□□□ -1.81
GPC1P35052 RNU6-1274P-201ENST00000384557 107 ntBASIC3.76□□□□□ -1.81
GPC1P35052 RNA5SP252-201ENST00000391131 119 ntBASIC3.76□□□□□ -1.81
GPC1P35052 RNU2-32P-201ENST00000411193 191 ntBASIC3.76□□□□□ -1.81
GPC1P35052 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.76□□□□□ -1.81
GPC1P35052 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
GPC1P35052 COX6CP6-201ENST00000490840 228 ntBASIC3.76□□□□□ -1.81
GPC1P35052 RN7SKP43-201ENST00000516173 320 ntBASIC3.76□□□□□ -1.81
GPC1P35052 RNA5SP143-201ENST00000516936 115 ntBASIC3.76□□□□□ -1.81
GPC1P35052 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
GPC1P35052 MIR486-1-201ENST00000612171 68 ntBASIC3.76□□□□□ -1.81
GPC1P35052 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
GPC1P35052 AL589743.1-201ENST00000551932 2712 ntBASIC3.76□□□□□ -1.81
GPC1P35052 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
GPC1P35052 MIR423-201ENST00000362201 94 ntBASIC3.75□□□□□ -1.81
GPC1P35052 RNU6-440P-201ENST00000390882 105 ntBASIC3.75□□□□□ -1.81
GPC1P35052 AP000567.1-201ENST00000406413 156 ntBASIC3.75□□□□□ -1.81
GPC1P35052 Z98941.1-201ENST00000407764 100 ntBASIC3.75□□□□□ -1.81
GPC1P35052 AC018634.1-201ENST00000437554 401 ntBASIC3.75□□□□□ -1.81
GPC1P35052 MRPS36P2-201ENST00000512569 299 ntBASIC3.75□□□□□ -1.81
GPC1P35052 RNU6-1149P-201ENST00000516810 97 ntBASIC3.75□□□□□ -1.81
GPC1P35052 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
GPC1P35052 AC244505.7-201ENST00000599675 272 ntBASIC3.75□□□□□ -1.81
GPC1P35052 IPO8P1-201ENST00000455509 3109 ntBASIC3.75□□□□□ -1.81
GPC1P35052 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
GPC1P35052 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
GPC1P35052 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
GPC1P35052 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.74□□□□□ -1.81
GPC1P35052 RPS26P8-201ENST00000393490 348 ntBASIC3.74□□□□□ -1.81
GPC1P35052 AL513477.1-202ENST00000417061 214 ntBASIC3.74□□□□□ -1.81
GPC1P35052 PPIAP15-201ENST00000479662 484 ntBASIC3.74□□□□□ -1.81
GPC1P35052 MRPS17P9-201ENST00000511924 393 ntBASIC3.74□□□□□ -1.81
GPC1P35052 AC011406.1-201ENST00000512440 370 ntBASIC3.74□□□□□ -1.81
GPC1P35052 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.74□□□□□ -1.81
GPC1P35052 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.74□□□□□ -1.81
GPC1P35052 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.74□□□□□ -1.81
GPC1P35052 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
GPC1P35052 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
GPC1P35052 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
GPC1P35052 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
GPC1P35052 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.73□□□□□ -1.81
GPC1P35052 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GPC1P35052 TNPO1P3-201ENST00000436471 2662 ntBASIC3.73□□□□□ -1.81
GPC1P35052 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
GPC1P35052 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
GPC1P35052 RNA5SP130-201ENST00000364431 114 ntBASIC3.73□□□□□ -1.81
GPC1P35052 MIR488-201ENST00000365739 83 ntBASIC3.73□□□□□ -1.81
GPC1P35052 SNORD61-201ENST00000384252 73 ntBASIC3.73□□□□□ -1.81
GPC1P35052 Y_RNA.544-201ENST00000384650 113 ntBASIC3.73□□□□□ -1.81
GPC1P35052 MIR767-201ENST00000390228 109 ntBASIC3.73□□□□□ -1.81
GPC1P35052 RPL21P129-201ENST00000491732 478 ntBASIC3.73□□□□□ -1.81
GPC1P35052 AC093663.1-201ENST00000497190 394 ntBASIC3.73□□□□□ -1.81
GPC1P35052 RNU6-113P-201ENST00000516653 101 ntBASIC3.73□□□□□ -1.81
GPC1P35052 RNU6-1096P-201ENST00000517089 102 ntBASIC3.73□□□□□ -1.81
GPC1P35052 SNORA31.21-201ENST00000517180 77 ntBASIC3.73□□□□□ -1.81
GPC1P35052 MIR8058-201ENST00000615737 89 ntBASIC3.73□□□□□ -1.81
GPC1P35052 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
GPC1P35052 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.73□□□□□ -1.81
GPC1P35052 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GPC1P35052 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
GPC1P35052 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC1P35052 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.72□□□□□ -1.81
GPC1P35052 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC1P35052 RNA5SP173-201ENST00000364857 136 ntBASIC3.72□□□□□ -1.81
GPC1P35052 RNA5SP479-201ENST00000364858 117 ntBASIC3.72□□□□□ -1.81
GPC1P35052 NDUFA4P2-201ENST00000489989 244 ntBASIC3.72□□□□□ -1.81
GPC1P35052 RNU6-109P-201ENST00000516364 107 ntBASIC3.72□□□□□ -1.81
GPC1P35052 RNU6-184P-201ENST00000516514 107 ntBASIC3.72□□□□□ -1.81
GPC1P35052 RNU6-965P-201ENST00000516721 96 ntBASIC3.72□□□□□ -1.81
GPC1P35052 RNA5SP179-201ENST00000517284 121 ntBASIC3.72□□□□□ -1.81
GPC1P35052 AP003327.1-201ENST00000529684 127 ntBASIC3.72□□□□□ -1.81
GPC1P35052 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.72□□□□□ -1.81
GPC1P35052 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.72□□□□□ -1.81
GPC1P35052 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.72□□□□□ -1.81
GPC1P35052 AC062037.1-201ENST00000605302 128 ntBASIC3.72□□□□□ -1.81
GPC1P35052 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC1P35052 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.72□□□□□ -1.81
GPC1P35052 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GPC1P35052 AC009487.4-201ENST00000624969 3585 ntBASIC3.72□□□□□ -1.81
GPC1P35052 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
GPC1P35052 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC1P35052 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.71□□□□□ -1.82
GPC1P35052 RNA5SP399-201ENST00000364003 117 ntBASIC3.71□□□□□ -1.82
GPC1P35052 RNU6-1292P-201ENST00000383856 107 ntBASIC3.71□□□□□ -1.82
GPC1P35052 MIR181B1-201ENST00000385240 110 ntBASIC3.71□□□□□ -1.82
GPC1P35052 AL031121.1-201ENST00000406553 254 ntBASIC3.71□□□□□ -1.82
GPC1P35052 AC004975.1-201ENST00000428733 208 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 341.8 ms