Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC116562.3-201ENST00000506136 177 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.33□□□□□ -2.46
CKS2P33552 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.33□□□□□ -2.46
CKS2P33552 RNA5SP436-201ENST00000516020 115 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 RNA5SP220-201ENST00000516298 104 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 RNU6-344P-201ENST00000516635 111 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 RNU6-58P-201ENST00000517143 103 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 AC068587.5-201ENST00000528506 175 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.33□□□□□ -2.46
CKS2P33552 MIR548AO-201ENST00000579992 96 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 MIR5190-201ENST00000581537 80 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 MIR4438-201ENST00000585271 93 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 AC090517.2-201ENST00000614966 680 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 AC007742.2-201ENST00000618226 398 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 AC010487.4-201ENST00000637027 61 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 ZNF204P-201ENST00000416749 2397 ntBASIC-0.33□□□□□ -2.46
CKS2P33552 SNORA1B-201ENST00000362535 133 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 SNORA8.2-201ENST00000384372 139 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 RNA5SP482-201ENST00000391269 118 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 SNORA75.6-201ENST00000391318 127 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 MIR891A-201ENST00000401237 79 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 MTND3P1-201ENST00000441336 220 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 BTBD7P2-201ENST00000441962 620 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.34□□□□□ -2.46
CKS2P33552 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.34□□□□□ -2.46
CKS2P33552 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.34□□□□□ -2.46
CKS2P33552 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.34□□□□□ -2.46
CKS2P33552 RNU1-117P-201ENST00000517041 158 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 AC010376.1-201ENST00000522101 334 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 AC016957.1-201ENST00000534895 309 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.34□□□□□ -2.46
CKS2P33552 BNIP3P40-201ENST00000596017 556 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 RNU6-489P-201ENST00000618289 107 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 AP000943.4-201ENST00000622912 357 ntBASIC-0.34□□□□□ -2.46
CKS2P33552 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
CKS2P33552 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.34□□□□□ -2.46
CKS2P33552 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 MIR520C-201ENST00000385005 87 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 MIR1185-2-201ENST00000408687 86 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.35□□□□□ -2.47
CKS2P33552 AL590632.1-201ENST00000424289 371 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 MRPS10P1-201ENST00000448483 130 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 AC112204.1-201ENST00000502591 103 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 SNORA40.12-201ENST00000516329 111 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.35□□□□□ -2.47
CKS2P33552 AC104383.1-201ENST00000530297 370 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.35□□□□□ -2.47
CKS2P33552 MIR3678-201ENST00000578455 94 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 AC010999.1-201ENST00000611856 324 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 AC022709.1-201ENST00000615967 87 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 AL031667.3-201ENST00000620124 655 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 AC138649.3-201ENST00000622154 254 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 AC022418.1-201ENST00000624118 445 ntBASIC-0.35□□□□□ -2.47
CKS2P33552 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.35□□□□□ -2.47
CKS2P33552 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 RNU6-613P-201ENST00000410412 108 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.36□□□□□ -2.47
CKS2P33552 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.36□□□□□ -2.47
CKS2P33552 RPL37P21-201ENST00000435890 276 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.36□□□□□ -2.47
CKS2P33552 SNORA19.3-201ENST00000516165 130 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 SNORA74.3-201ENST00000517108 154 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.36□□□□□ -2.47
CKS2P33552 AC002044.1-201ENST00000606707 158 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 MIR6734-201ENST00000621166 68 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 AC011155.2-201ENST00000623202 216 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.36□□□□□ -2.47
CKS2P33552 SCARNA4-201ENST00000629045 128 ntBASIC-0.36□□□□□ -2.47
CKS2P33552 RNU6-222P-201ENST00000362438 107 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 MIR644A-201ENST00000385262 94 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 RNA5SP494-201ENST00000410653 129 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 MTATP6P20-201ENST00000414147 562 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 ZNF885P-201ENST00000420174 1098 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.37□□□□□ -2.47
CKS2P33552 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.37□□□□□ -2.47
CKS2P33552 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.37□□□□□ -2.47
CKS2P33552 RNU6-341P-201ENST00000516973 96 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 AC022616.3-201ENST00000523940 148 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 AC023442.1-201ENST00000531247 422 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 AP002004.2-201ENST00000531656 154 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.37□□□□□ -2.47
CKS2P33552 MIR4764-201ENST00000580680 88 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 AC091178.2-201ENST00000584401 117 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 AC104010.1-201ENST00000616889 150 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 uc_338.16-201ENST00000621804 95 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 AC091948.2-201ENST00000636510 279 ntBASIC-0.37□□□□□ -2.47
CKS2P33552 SNORA9.1-201ENST00000362412 131 ntBASIC-0.38□□□□□ -2.47
CKS2P33552 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.38□□□□□ -2.47
CKS2P33552 MIR145-201ENST00000384967 88 ntBASIC-0.38□□□□□ -2.47
CKS2P33552 MIR610-201ENST00000385139 96 ntBASIC-0.38□□□□□ -2.47
CKS2P33552 AL355143.1-201ENST00000407101 841 ntBASIC-0.38□□□□□ -2.47
CKS2P33552 RPS27AP14-201ENST00000422868 454 ntBASIC-0.38□□□□□ -2.47
CKS2P33552 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.38□□□□□ -2.47
CKS2P33552 AL353997.1-201ENST00000432936 108 ntBASIC-0.38□□□□□ -2.47
CKS2P33552 Z98949.2-201ENST00000440996 144 ntBASIC-0.38□□□□□ -2.47
CKS2P33552 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms