Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 HMGB3P17-201ENST00000504195 649 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 AC023141.11-201ENST00000508864 202 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 Y_RNA.673-201ENST00000516306 88 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 RNU6-107P-201ENST00000516643 102 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 AC008749.1-201ENST00000597650 306 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 AC004467.1-201ENST00000615678 330 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.75□□□□□ -1.97
SLC6A4P31645 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SLC6A4P31645 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SLC6A4P31645 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SLC6A4P31645 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC6A4P31645 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A4P31645 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
SLC6A4P31645 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC6A4P31645 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A4P31645 SNORA25.1-201ENST00000362326 128 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 RNU6-1266P-201ENST00000362794 105 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 U8.9-201ENST00000365667 134 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 SNORA67.2-201ENST00000384300 149 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SLC6A4P31645 RNU6-907P-201ENST00000390924 102 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 SNORD58.1-201ENST00000391313 66 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 RNU2-54P-201ENST00000410299 190 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A4P31645 CKS1BP2-201ENST00000497342 240 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A4P31645 SCARNA24.2-201ENST00000516968 130 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 RNU1-117P-201ENST00000517041 158 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 MIR3684-201ENST00000579779 74 ntBASIC2.74□□□□□ -1.97
SLC6A4P31645 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A4P31645 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC6A4P31645 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A4P31645 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A4P31645 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A4P31645 Y_RNA.286-201ENST00000364813 102 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 RNU6-1026P-201ENST00000384465 108 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 MIR196B-201ENST00000384852 84 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 MIR95-201ENST00000385072 81 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 RNU6-1248P-201ENST00000391096 64 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 FO393413.1-201ENST00000402892 195 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 AL590004.2-201ENST00000404787 371 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 AL603910.2-201ENST00000407268 136 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 RNA5SP504-201ENST00000410676 117 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 RNU2-63P-201ENST00000410792 194 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC6A4P31645 AL161788.1-201ENST00000441805 169 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 AC114982.1-201ENST00000469402 321 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC6A4P31645 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC6A4P31645 RNU6-1098P-201ENST00000516772 96 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 RNU6-56P-201ENST00000516986 93 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SLC6A4P31645 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SLC6A4P31645 AC078938.1-201ENST00000620993 318 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 AC091932.3-201ENST00000624223 323 ntBASIC2.73□□□□□ -1.97
SLC6A4P31645 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC6A4P31645 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC6A4P31645 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A4P31645 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A4P31645 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC6A4P31645 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SLC6A4P31645 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
SLC6A4P31645 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SLC6A4P31645 Y_RNA.44-201ENST00000362676 108 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 SNORD27-201ENST00000363981 72 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 RNU6-234P-201ENST00000365229 104 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC6A4P31645 Y_RNA.383-201ENST00000383855 97 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 Y_RNA.446-201ENST00000384178 104 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC6A4P31645 AC104332.2-201ENST00000429959 156 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC6A4P31645 SUMO1P2-201ENST00000452524 304 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.72□□□□□ -1.97
SLC6A4P31645 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC6A4P31645 RNU4-71P-201ENST00000516258 113 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC6A4P31645 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC6A4P31645 AC055872.1-201ENST00000570978 278 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 AL109918.3-201ENST00000603072 338 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 AL356280.1-201ENST00000603614 379 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC6A4P31645 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 AL449363.1-201ENST00000617815 186 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SLC6A4P31645 AC009487.4-201ENST00000624969 3585 ntBASIC2.72□□□□□ -1.97
SLC6A4P31645 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SLC6A4P31645 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLC6A4P31645 Y_RNA.54-201ENST00000362766 105 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 RNU6-944P-201ENST00000364023 107 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 SNORD87-201ENST00000364849 89 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
SLC6A4P31645 AC009963.1-201ENST00000417265 157 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 AC024067.1-201ENST00000426199 223 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 UBL5P3-201ENST00000475112 231 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 TRBV12-1-201ENST00000479785 344 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 RN7SL499P-201ENST00000481141 276 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms