Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SNORA7.1-201ENST00000363750 139 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 RNU6-534P-201ENST00000364877 106 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 SNORD116-2-201ENST00000384274 95 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 RNU6-933P-201ENST00000384424 107 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 SNORD116-6-201ENST00000384711 96 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
HLA-DMAP28067 SNORA12.1-201ENST00000390873 148 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 SNORA17.3-201ENST00000391159 129 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 RNU4-62P-201ENST00000410125 130 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 COX6CP10-201ENST00000416832 224 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 BTF3P4-201ENST00000418852 495 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DMAP28067 NDUFA5P4-201ENST00000436704 385 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 MTCO3P18-201ENST00000440206 761 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AL353572.1-201ENST00000442490 417 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AC098826.2-201ENST00000452011 651 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DMAP28067 RPL30P10-201ENST00000488148 337 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 MTCO2P30-201ENST00000503662 364 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DMAP28067 RN7SKP88-201ENST00000516847 250 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DMAP28067 AC015712.3-201ENST00000559380 164 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 MIR4709-201ENST00000577272 72 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 MIR4661-201ENST00000582720 75 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AL022345.2-201ENST00000606307 135 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 7SK.8-201ENST00000612110 250 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AL138726.1-201ENST00000614873 333 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 7SK.11-201ENST00000615477 250 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AC006504.8-201ENST00000621046 635 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 7SK.13-201ENST00000622040 250 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 AL078596.1-201ENST00000624856 447 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 snoZ196.1-201ENST00000625269 89 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
HLA-DMAP28067 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
HLA-DMAP28067 RNU6-451P-201ENST00000362921 107 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 Y_RNA.140-201ENST00000363474 103 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
HLA-DMAP28067 POLR2J4-204ENST00000418424 324 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 RPL30P16-201ENST00000419341 429 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.85□□□□□ -2.27
HLA-DMAP28067 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.85□□□□□ -2.27
HLA-DMAP28067 PCMTD1P1-201ENST00000455560 355 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 RNU7-95P-201ENST00000459222 64 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 HMGN2P26-201ENST00000463169 339 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DMAP28067 SNORA25.14-201ENST00000516481 132 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 RNU6-344P-201ENST00000516635 111 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 RNA5SP454-201ENST00000517231 127 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 RNU7-128P-201ENST00000517247 62 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DMAP28067 PIGPP4-201ENST00000584447 307 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 AC021506.2-201ENST00000612354 169 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 AC009248.2-201ENST00000619826 254 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 AC024614.3-201ENST00000637860 256 ntBASIC0.85□□□□□ -2.27
HLA-DMAP28067 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.85□□□□□ -2.27
HLA-DMAP28067 MTND4P12-201ENST00000498999 1377 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 RNA5SP99-201ENST00000364020 114 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 RNA5SP259-201ENST00000365541 109 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 Y_RNA.415-201ENST00000384012 112 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 MIR517A-201ENST00000385001 87 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 MIR1253-201ENST00000408273 105 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 AC108667.1-201ENST00000428618 249 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 SEPT14P3-201ENST00000439401 183 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DMAP28067 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DMAP28067 AL732372.2-207ENST00000445840 183 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 MTCO2P7-201ENST00000446518 666 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DMAP28067 SEPT14P2-201ENST00000453405 183 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 RNU7-34P-201ENST00000459394 64 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 RNU6-221P-201ENST00000459541 99 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 SEPT14P4-201ENST00000513445 186 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 CYCSP23-201ENST00000519781 313 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 FO082796.1-201ENST00000523795 183 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.84□□□□□ -2.27
HLA-DMAP28067 AC027288.2-201ENST00000553028 243 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 MIR4524B-201ENST00000581569 115 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 MIR3942-201ENST00000585264 109 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 AL162413.1-201ENST00000603198 110 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 AL390123.1-201ENST00000603216 237 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 MIR6078-201ENST00000611069 100 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 DISC2.1-201ENST00000612827 205 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 AL353770.2-201ENST00000620024 78 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DMAP28067 AC008873.1-201ENST00000625051 138 ntBASIC0.84□□□□□ -2.27
HLA-DMAP28067 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
HLA-DMAP28067 RNU6-873P-201ENST00000363833 107 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 SNORD115-8-201ENST00000363856 82 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 SNORD115-38-201ENST00000365037 82 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 RNU6-1240P-201ENST00000365155 104 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 RNA5SP323-201ENST00000391094 133 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 RNU6-1186P-201ENST00000410429 97 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 RNU2-16P-201ENST00000410712 136 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 RNU6-1148P-201ENST00000410992 104 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.83□□□□□ -2.28
HLA-DMAP28067 RPS26P45-201ENST00000471748 340 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms