Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC243960.4-201ENST00000600532 288 ntBASIC0.92□□□□□ -2.26
COL5A3P25940 AC078795.3-201ENST00000602913 472 ntBASIC0.92□□□□□ -2.26
COL5A3P25940 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.92□□□□□ -2.26
COL5A3P25940 PCGEM1.1-201ENST00000613431 131 ntBASIC0.92□□□□□ -2.26
COL5A3P25940 AC022202.1-201ENST00000613515 211 ntBASIC0.92□□□□□ -2.26
COL5A3P25940 MIR3688-2-201ENST00000636963 87 ntBASIC0.92□□□□□ -2.26
COL5A3P25940 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
COL5A3P25940 RNU6-227P-201ENST00000362865 103 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 RNU1-23P-201ENST00000363361 144 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 RNU6-1013P-201ENST00000384180 107 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 SNORA29-201ENST00000384183 140 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 RNU6-784P-201ENST00000384330 106 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 Y_RNA.530-201ENST00000384587 101 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 MIR517A-201ENST00000385001 87 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 MIR29B2-201ENST00000385055 81 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.91□□□□□ -2.26
COL5A3P25940 MIR1277-201ENST00000408536 78 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 RNU6-325P-201ENST00000411132 105 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 MTND1P2-201ENST00000430604 821 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.91□□□□□ -2.26
COL5A3P25940 AC018868.1-201ENST00000491307 315 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.91□□□□□ -2.26
COL5A3P25940 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.91□□□□□ -2.26
COL5A3P25940 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.91□□□□□ -2.26
COL5A3P25940 RNU6-358P-201ENST00000516564 75 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.91□□□□□ -2.26
COL5A3P25940 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.91□□□□□ -2.26
COL5A3P25940 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.91□□□□□ -2.26
COL5A3P25940 TRAV32-201ENST00000553993 340 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.91□□□□□ -2.26
COL5A3P25940 CYP4A27P-201ENST00000567218 190 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.91□□□□□ -2.26
COL5A3P25940 MIR5696-201ENST00000578474 85 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 AL078605.1-201ENST00000603529 500 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 MIR3976-201ENST00000606807 139 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 AC019193.3-201ENST00000609144 554 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 U1.36-201ENST00000620684 176 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 AC090517.3-201ENST00000625170 141 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 AL450472.1-202ENST00000637286 180 ntBASIC0.91□□□□□ -2.26
COL5A3P25940 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.9□□□□□ -2.27
COL5A3P25940 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
COL5A3P25940 RNU6-438P-201ENST00000365561 103 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.9□□□□□ -2.27
COL5A3P25940 Y_RNA.504-201ENST00000384481 104 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 Y_RNA.573-201ENST00000384763 105 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 MIR514A2-201ENST00000385131 88 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 MIR514A3-201ENST00000385132 88 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 MIR1262-201ENST00000408276 93 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
COL5A3P25940 AL117339.3-201ENST00000418733 162 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 snoU13.30-201ENST00000458951 104 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.9□□□□□ -2.27
COL5A3P25940 PTP4A1P4-201ENST00000512479 322 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 RNU4-49P-201ENST00000516080 140 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.9□□□□□ -2.27
COL5A3P25940 AC233702.2-202ENST00000562547 291 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.9□□□□□ -2.27
COL5A3P25940 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.9□□□□□ -2.27
COL5A3P25940 AC100830.2-201ENST00000581636 240 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 AC073410.2-201ENST00000603240 332 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 AC093913.1-201ENST00000614178 329 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 AC009033.1-201ENST00000624279 431 ntBASIC0.9□□□□□ -2.27
COL5A3P25940 AC092268.1-201ENST00000342691 405 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 RNU6-845P-201ENST00000362578 103 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 RNU6-743P-201ENST00000364151 106 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 RNU6-128P-201ENST00000383976 107 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 Y_RNA.414-201ENST00000384011 101 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 RNU6-611P-201ENST00000384276 104 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 RNU6-160P-201ENST00000384591 107 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 MT-TL1-201ENST00000386347 75 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL5A3P25940 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 RNA5SP118-201ENST00000410385 109 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.89□□□□□ -2.27
COL5A3P25940 NCOR1P3-201ENST00000420479 303 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AL590556.1-201ENST00000423231 483 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 MRPS10P2-201ENST00000431226 381 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.89□□□□□ -2.27
COL5A3P25940 RNU7-30P-201ENST00000516835 62 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.89□□□□□ -2.27
COL5A3P25940 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.89□□□□□ -2.27
COL5A3P25940 AC022254.1-201ENST00000567857 235 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 POLR3GP2-201ENST00000588366 668 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AC018638.8-201ENST00000588755 281 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AC084782.3-201ENST00000612282 578 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AC005520.5-201ENST00000613926 164 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 U6atac.1-201ENST00000616025 117 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 MIR1248-201ENST00000629190 106 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL5A3P25940 Y_RNA.280-201ENST00000364765 112 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AC012306.1-201ENST00000423267 114 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.89□□□□□ -2.27
COL5A3P25940 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.89□□□□□ -2.27
COL5A3P25940 SNORD5.1-201ENST00000458800 75 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 AC091874.1-201ENST00000511402 339 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.89□□□□□ -2.27
COL5A3P25940 RNU5F-4P-201ENST00000516581 114 ntBASIC0.89□□□□□ -2.27
COL5A3P25940 RNU6-612P-201ENST00000516909 102 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms