| CPA3 | P15088 | NDUFB4P10-201 | ENST00000452541 | 359 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | snoU13.15-201 | ENST00000459407 | 104 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | RNU6-1016P-201 | ENST00000516689 | 94 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC100763.1-201 | ENST00000532735 | 522 nt | TSL 3 BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC112481.1-201 | ENST00000549669 | 901 nt | TSL 2 BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AL160236.1-201 | ENST00000556317 | 195 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC015845.1-201 | ENST00000579285 | 335 nt | TSL 3 BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC104984.5-201 | ENST00000586878 | 94 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | MZT1P2-201 | ENST00000604387 | 248 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | KCNQ1OT1_3.1-201 | ENST00000616504 | 116 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC138058.1-201 | ENST00000620572 | 449 nt | TSL 3 BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | U6.108-201 | ENST00000637764 | 58 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC006026.1-201 | ENST00000444025 | 1803 nt | BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | CHST9-202 | ENST00000581714 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | SEMG2-201 | ENST00000372769 | 2051 nt | APPRIS P1 TSL 1 (best) BASIC | 1.54 | □□□□□ -2.16 | | |
| CPA3 | P15088 | MIR302D-201 | ENST00000362275 | 68 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | MIR126-201 | ENST00000362291 | 85 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | Y_RNA.72-201 | ENST00000362894 | 103 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | U3.8-201 | ENST00000363675 | 217 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | RNU6-280P-201 | ENST00000364145 | 104 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | SNORA4.2-201 | ENST00000365313 | 147 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | RNU6-793P-201 | ENST00000384233 | 104 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | MIR320A-201 | ENST00000385302 | 82 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | RNU1-139P-201 | ENST00000391307 | 165 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | Y_RNA.619-201 | ENST00000410951 | 90 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | JTBP1-201 | ENST00000441314 | 247 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC073910.1-201 | ENST00000445047 | 438 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC093303.1-201 | ENST00000514549 | 295 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AP003097.2-201 | ENST00000530126 | 178 nt | TSL 3 BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AC100781.1-201 | ENST00000597142 | 383 nt | TSL 3 BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | MIR7974-201 | ENST00000615835 | 79 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | AP000648.3-201 | ENST00000623539 | 4507 nt | BASIC | 1.53 | □□□□□ -2.16 | | |
| CPA3 | P15088 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MTND5P10-201 | ENST00000603719 | 1809 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-414P-201 | ENST00000363705 | 104 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-281P-201 | ENST00000384212 | 103 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-1050P-201 | ENST00000410388 | 107 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC074085.1-201 | ENST00000413598 | 418 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AL627309.4-201 | ENST00000496488 | 457 nt | TSL 5 BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | HMGN1P13-201 | ENST00000505795 | 138 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | FRG2DP-202 | ENST00000566967 | 323 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR4255-201 | ENST00000579351 | 72 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC011712.1-201 | ENST00000588959 | 234 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | 7SK.7-201 | ENST00000603504 | 247 nt | BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | SPTSSB-205 | ENST00000620149 | 231 nt | APPRIS P1 BASIC | 1.52 | □□□□□ -2.17 | | |
| CPA3 | P15088 | TDRD15-202 | ENST00000622654 | 5805 nt | APPRIS P1 BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-874P-201 | ENST00000362390 | 105 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | Y_RNA.106-201 | ENST00000363189 | 100 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | Y_RNA.179-201 | ENST00000363844 | 90 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | Y_RNA.184-201 | ENST00000363884 | 108 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-593P-201 | ENST00000364716 | 112 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-1240P-201 | ENST00000365155 | 104 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR504-201 | ENST00000385065 | 83 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | U8.13-201 | ENST00000390842 | 128 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR1304-201 | ENST00000408243 | 91 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AL606517.2-201 | ENST00000442855 | 241 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | snoU13.9-201 | ENST00000458927 | 103 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-1114P-201 | ENST00000516022 | 107 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-1146P-201 | ENST00000516282 | 102 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNA5SP481-201 | ENST00000516814 | 122 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | TRAV1-1-201 | ENST00000542354 | 392 nt | APPRIS P1 BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR5695-201 | ENST00000579717 | 85 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC092794.1-201 | ENST00000612734 | 582 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR6715A-201 | ENST00000615929 | 79 nt | BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | ASPN-202 | ENST00000375544 | 2470 nt | APPRIS P1 TSL 1 (best) BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | CENPQ-201 | ENST00000335783 | 1733 nt | APPRIS P1 TSL 1 (best) BASIC | 1.51 | □□□□□ -2.17 | | |
| CPA3 | P15088 | Y_RNA.88-201 | ENST00000363029 | 99 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU6-271P-201 | ENST00000363858 | 105 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | Y_RNA.248-201 | ENST00000364501 | 109 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | Y_RNA.279-201 | ENST00000364763 | 95 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | SNORA72.2-201 | ENST00000365028 | 127 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR194-1-201 | ENST00000384892 | 85 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AL627390.1-201 | ENST00000396055 | 340 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | EBAG9P1-201 | ENST00000418955 | 543 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC008134.1-201 | ENST00000420943 | 193 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | USMG5P1-201 | ENST00000425964 | 177 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC069257.2-201 | ENST00000441819 | 155 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RPS27P1-201 | ENST00000450552 | 247 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RPL36AP21-201 | ENST00000490372 | 323 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AL163195.1-201 | ENST00000496941 | 348 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | Y_RNA.706-201 | ENST00000516933 | 99 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU7-128P-201 | ENST00000517247 | 62 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC105029.1-201 | ENST00000520250 | 669 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AL049869.2-201 | ENST00000556634 | 365 nt | TSL 2 BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC125232.2-201 | ENST00000592457 | 143 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | BX248123.2-201 | ENST00000606318 | 124 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC100812.1-201 | ENST00000607622 | 580 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC009229.3-201 | ENST00000608056 | 282 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC010999.1-201 | ENST00000611856 | 324 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CPA3 | P15088 | AC100821.1-201 | ENST00000523153 | 2479 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CPA3 | P15088 | CASC19-280 | ENST00000642102 | 1351 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CPA3 | P15088 | RNU1-42P-201 | ENST00000364033 | 160 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CPA3 | P15088 | Y_RNA.404-201 | ENST00000383978 | 102 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR515-2-201 | ENST00000384883 | 83 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR515-1-201 | ENST00000384884 | 83 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CPA3 | P15088 | OPRPN-201 | ENST00000399575 | 1040 nt | APPRIS P1 TSL 1 (best) BASIC | 1.49 | □□□□□ -2.17 | | |
| CPA3 | P15088 | MIR190B-201 | ENST00000401119 | 79 nt | BASIC | 1.49 | □□□□□ -2.17 | | |