Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.06□□□□□ -1.92
COL6A2P12110 RNU6-861P-201ENST00000516745 106 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 RNU6-586P-201ENST00000517265 104 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.06□□□□□ -1.92
COL6A2P12110 AC087441.2-201ENST00000529141 262 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 AL008718.3-201ENST00000610217 321 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.06□□□□□ -1.92
COL6A2P12110 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL6A2P12110 AL035425.3-201ENST00000564206 4996 ntBASIC3.06□□□□□ -1.92
COL6A2P12110 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL6A2P12110 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
COL6A2P12110 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
COL6A2P12110 RNU6-944P-201ENST00000364023 107 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 RNU6-801P-201ENST00000364087 105 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 Y_RNA.240-201ENST00000364469 95 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 MIR1283-1-201ENST00000408494 87 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 RNU4-61P-201ENST00000411243 107 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 AL392103.1-201ENST00000447000 198 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 AC080013.2-201ENST00000460866 323 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 AC008155.2-201ENST00000464337 397 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 AC109925.1-201ENST00000478069 331 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 RN7SL20P-201ENST00000488827 297 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 RN7SL633P-201ENST00000488974 297 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.05□□□□□ -1.92
COL6A2P12110 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.05□□□□□ -1.92
COL6A2P12110 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
COL6A2P12110 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.05□□□□□ -1.92
COL6A2P12110 RNU6-234P-201ENST00000365229 104 ntBASIC3.04□□□□□ -1.92
COL6A2P12110 RNU6-746P-201ENST00000384112 109 ntBASIC3.04□□□□□ -1.92
COL6A2P12110 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.04□□□□□ -1.92
COL6A2P12110 RNU4-47P-201ENST00000410876 114 ntBASIC3.04□□□□□ -1.92
COL6A2P12110 RNU7-14P-201ENST00000459331 62 ntBASIC3.04□□□□□ -1.92
COL6A2P12110 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.04□□□□□ -1.92
COL6A2P12110 RNY3P16-201ENST00000516338 101 ntBASIC3.04□□□□□ -1.92
COL6A2P12110 AC022559.1-201ENST00000520905 205 ntBASIC3.04□□□□□ -1.92
COL6A2P12110 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.04□□□□□ -1.92
COL6A2P12110 MIR4308-201ENST00000580634 81 ntBASIC3.04□□□□□ -1.92
COL6A2P12110 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL6A2P12110 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.03□□□□□ -1.92
COL6A2P12110 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
COL6A2P12110 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
COL6A2P12110 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.03□□□□□ -1.92
COL6A2P12110 Y_RNA.308-201ENST00000365043 101 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 Y_RNA.368-201ENST00000365547 113 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 BMS1P22-201ENST00000414726 313 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 BTF3P11-201ENST00000426582 477 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 Y_RNA.662-201ENST00000516028 97 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 AC109329.2-201ENST00000519658 482 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.03□□□□□ -1.92
COL6A2P12110 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.03□□□□□ -1.92
COL6A2P12110 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL6A2P12110 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.03□□□□□ -1.92
COL6A2P12110 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL6A2P12110 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.93
COL6A2P12110 AC009487.4-201ENST00000624969 3585 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL6A2P12110 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
COL6A2P12110 RNU6-923P-201ENST00000364753 107 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 SNORD31B-201ENST00000364977 69 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 MIR95-201ENST00000385072 81 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 MIR181B1-201ENST00000385240 110 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 RNU6-763P-201ENST00000390865 106 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 FO393413.1-201ENST00000402892 195 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
COL6A2P12110 AL135790.2-201ENST00000437701 267 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.02□□□□□ -1.93
COL6A2P12110 AC074290.1-201ENST00000448883 135 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 AC114982.1-201ENST00000469402 321 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 MIR449C-201ENST00000516047 92 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 SNORA70.12-201ENST00000516084 153 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.02□□□□□ -1.93
COL6A2P12110 AC105245.1-201ENST00000581934 244 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 MIR4753-201ENST00000585119 83 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 AC005000.2-201ENST00000605468 310 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 AC069294.1-201ENST00000608397 350 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.02□□□□□ -1.93
COL6A2P12110 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL6A2P12110 AL159152.1-201ENST00000635019 2587 ntBASIC3.02□□□□□ -1.93
COL6A2P12110 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL6A2P12110 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
COL6A2P12110 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL6A2P12110 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.01□□□□□ -1.93
COL6A2P12110 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.01□□□□□ -1.93
COL6A2P12110 RNU6-1180P-201ENST00000364935 107 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 Y_RNA.456-201ENST00000384232 111 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 RNU6-975P-201ENST00000384296 105 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 AL139095.1-201ENST00000404326 391 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.01□□□□□ -1.93
COL6A2P12110 BX510359.1-201ENST00000456973 237 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 RNU7-57P-201ENST00000459540 60 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 RN7SL863P-201ENST00000462370 296 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.01□□□□□ -1.93
COL6A2P12110 RNU6-255P-201ENST00000516957 105 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 MRPS18CP4-201ENST00000535821 231 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.01□□□□□ -1.93
COL6A2P12110 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms