Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC244636.1-201ENST00000421152 228 ntBASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 RNU6-507P-201ENST00000516045 100 ntBASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 AC093023.1-201ENST00000547375 507 ntBASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 AC133104.2-201ENST00000615272 193 ntBASIC1.84□□□□□ -2.11
RAB40ALP0C0E4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
RAB40ALP0C0E4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
RAB40ALP0C0E4 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 RNU6-874P-201ENST00000362390 105 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 RNU6-99P-201ENST00000364721 107 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 RNU6-890P-201ENST00000384121 107 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 RNA5SP212-201ENST00000391223 107 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 MTCYBP4-201ENST00000401524 249 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 HMGN2P38-201ENST00000423806 265 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 AC022493.2-201ENST00000506122 481 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.683-201ENST00000516508 93 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 AC090617.3-201ENST00000573670 475 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 MIR5089-201ENST00000580047 84 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 AC008749.1-201ENST00000597650 306 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 MZT1P2-201ENST00000604387 248 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 MIR1244-1-201ENST00000612829 85 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 AC091932.3-201ENST00000624223 323 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 snoZ196.1-201ENST00000625269 89 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 MIR1244-3-201ENST00000635744 85 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 MTND4LP32-201ENST00000636111 270 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 MIR1244-2-201ENST00000636449 85 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 MIR1244-4-202ENST00000636813 85 ntBASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
RAB40ALP0C0E4 RNA5SP99-201ENST00000364020 114 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.356-201ENST00000365475 113 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 RNU6-281P-201ENST00000384212 103 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 RNU6-1001P-201ENST00000411265 100 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AC060773.1-201ENST00000421698 310 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 MTCO3P10-201ENST00000455912 772 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 MRPS17P9-201ENST00000511924 393 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AC011406.1-201ENST00000512440 370 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 RNU6-120P-201ENST00000516077 103 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AL355375.2-201ENST00000574825 175 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 MIR5094-201ENST00000578766 85 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 AC006001.4-201ENST00000622243 395 ntBASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RAB40ALP0C0E4 MTND5P35-201ENST00000557537 1720 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.263-201ENST00000364659 114 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.358-201ENST00000365491 99 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 MIR548B-201ENST00000385247 97 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 SUMO2P12-201ENST00000405924 140 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 EIF1P2-201ENST00000428233 350 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 MIR2053-201ENST00000459295 91 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 FGF7P4-201ENST00000509595 295 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 AC125232.2-201ENST00000592457 143 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.804-201ENST00000615262 101 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 uc_338.20-201ENST00000621563 178 ntBASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB40ALP0C0E4 RNU6-862P-201ENST00000362804 105 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.70-201ENST00000362886 110 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 U3.8-201ENST00000363675 217 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 RNU6-879P-201ENST00000364328 108 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 SNORD116-29-201ENST00000384516 83 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.529-201ENST00000384586 119 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.557-201ENST00000384680 107 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 RNA5SP213-201ENST00000391031 106 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 RNY4P36-201ENST00000391116 96 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 MTND4LP11-201ENST00000422184 280 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 AL603825.1-201ENST00000438481 80 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 NDUFB4P10-201ENST00000452541 359 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 AC107393.1-201ENST00000512403 346 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 SUB1P3-201ENST00000564581 315 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms