Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-1067P-201ENST00000384752 107 ntBASIC0.32□□□□□ -2.36
TPM1P09493 AC244098.3-201ENST00000424803 96 ntBASIC0.32□□□□□ -2.36
TPM1P09493 USP9YP29-201ENST00000445112 563 ntBASIC0.32□□□□□ -2.36
TPM1P09493 RPS29P1-201ENST00000465274 159 ntBASIC0.32□□□□□ -2.36
TPM1P09493 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
TPM1P09493 RNU7-28P-201ENST00000516759 62 ntBASIC0.32□□□□□ -2.36
TPM1P09493 MTND1P5-201ENST00000517906 940 ntBASIC0.32□□□□□ -2.36
TPM1P09493 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TPM1P09493 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.32□□□□□ -2.36
TPM1P09493 AC023827.1-201ENST00000569247 97 ntBASIC0.32□□□□□ -2.36
TPM1P09493 AC245014.2-201ENST00000603689 287 ntBASIC0.32□□□□□ -2.36
TPM1P09493 AC246785.4-201ENST00000605374 287 ntBASIC0.32□□□□□ -2.36
TPM1P09493 AC093913.1-201ENST00000614178 329 ntBASIC0.32□□□□□ -2.36
TPM1P09493 AP001506.1-201ENST00000615444 211 ntBASIC0.32□□□□□ -2.36
TPM1P09493 AL442644.1-201ENST00000454390 3105 ntBASIC0.32□□□□□ -2.36
TPM1P09493 RNU6-245P-201ENST00000384020 107 ntBASIC0.31□□□□□ -2.36
TPM1P09493 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.31□□□□□ -2.36
TPM1P09493 AL663109.1-201ENST00000411498 844 ntBASIC0.31□□□□□ -2.36
TPM1P09493 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.31□□□□□ -2.36
TPM1P09493 DAP3P1-201ENST00000441522 278 ntBASIC0.31□□□□□ -2.36
TPM1P09493 AC093019.1-201ENST00000443135 252 ntBASIC0.31□□□□□ -2.36
TPM1P09493 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.31□□□□□ -2.36
TPM1P09493 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.31□□□□□ -2.36
TPM1P09493 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.31□□□□□ -2.36
TPM1P09493 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.31□□□□□ -2.36
TPM1P09493 MIR3192-201ENST00000584920 77 ntBASIC0.31□□□□□ -2.36
TPM1P09493 MIR4438-201ENST00000585271 93 ntBASIC0.31□□□□□ -2.36
TPM1P09493 AL512605.2-201ENST00000592972 256 ntBASIC0.31□□□□□ -2.36
TPM1P09493 SEPT14P17-201ENST00000617978 177 ntBASIC0.31□□□□□ -2.36
TPM1P09493 AP000720.1-201ENST00000625091 483 ntBASIC0.31□□□□□ -2.36
TPM1P09493 MIR6079-201ENST00000635807 62 ntBASIC0.31□□□□□ -2.36
TPM1P09493 OR5AK4P-201ENST00000635912 903 ntBASIC0.31□□□□□ -2.36
TPM1P09493 AC106754.1-201ENST00000562632 1513 ntBASIC0.31□□□□□ -2.36
TPM1P09493 RNU6-903P-201ENST00000391270 109 ntBASIC0.3□□□□□ -2.36
TPM1P09493 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.3□□□□□ -2.36
TPM1P09493 MTCYBP10-201ENST00000424905 650 ntBASIC0.3□□□□□ -2.36
TPM1P09493 AL593851.1-201ENST00000426171 157 ntBASIC0.3□□□□□ -2.36
TPM1P09493 MTCO1P19-201ENST00000443487 500 ntBASIC0.3□□□□□ -2.36
TPM1P09493 AP002963.1-201ENST00000530590 184 ntBASIC0.3□□□□□ -2.36
TPM1P09493 HIF1AP1-201ENST00000553642 175 ntBASIC0.3□□□□□ -2.36
TPM1P09493 AC011195.1-201ENST00000578177 177 ntBASIC0.3□□□□□ -2.36
TPM1P09493 MIR5583-1-201ENST00000580941 59 ntBASIC0.3□□□□□ -2.36
TPM1P09493 AL117336.2-201ENST00000602435 335 ntBASIC0.3□□□□□ -2.36
TPM1P09493 AC092354.1-201ENST00000606057 376 ntBASIC0.3□□□□□ -2.36
TPM1P09493 AL136317.1-201ENST00000612653 226 ntBASIC0.3□□□□□ -2.36
TPM1P09493 AC009161.2-201ENST00000624626 138 ntBASIC0.3□□□□□ -2.36
TPM1P09493 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.3□□□□□ -2.36
TPM1P09493 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
TPM1P09493 RNU6-1317P-201ENST00000364582 104 ntBASIC0.29□□□□□ -2.36
TPM1P09493 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.29□□□□□ -2.36
TPM1P09493 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
TPM1P09493 AL033528.1-201ENST00000453780 140 ntBASIC0.29□□□□□ -2.36
TPM1P09493 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.29□□□□□ -2.36
TPM1P09493 AC091133.4-201ENST00000511142 308 ntBASIC0.29□□□□□ -2.36
TPM1P09493 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
TPM1P09493 RNA5SP54-201ENST00000516951 92 ntBASIC0.29□□□□□ -2.36
TPM1P09493 MTND1P35-201ENST00000526739 508 ntBASIC0.29□□□□□ -2.36
TPM1P09493 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.29□□□□□ -2.36
TPM1P09493 AC064836.2-201ENST00000609491 462 ntBASIC0.29□□□□□ -2.36
TPM1P09493 AC243829.6-201ENST00000612652 106 ntBASIC0.29□□□□□ -2.36
TPM1P09493 AC007014.2-201ENST00000615581 479 ntBASIC0.29□□□□□ -2.36
TPM1P09493 MTND5P16-201ENST00000460269 1703 ntBASIC0.29□□□□□ -2.36
TPM1P09493 RNU6-1214P-201ENST00000363650 109 ntBASIC0.28□□□□□ -2.36
TPM1P09493 RNU6-282P-201ENST00000365357 103 ntBASIC0.28□□□□□ -2.36
TPM1P09493 SNORD114-22-201ENST00000365423 72 ntBASIC0.28□□□□□ -2.36
TPM1P09493 MIR487A-201ENST00000385009 80 ntBASIC0.28□□□□□ -2.36
TPM1P09493 SNORA40.3-201ENST00000390964 122 ntBASIC0.28□□□□□ -2.36
TPM1P09493 MIR450B-201ENST00000401182 78 ntBASIC0.28□□□□□ -2.36
TPM1P09493 MRPS10P1-201ENST00000448483 130 ntBASIC0.28□□□□□ -2.36
TPM1P09493 AC005178.1-201ENST00000508392 440 ntBASIC0.28□□□□□ -2.36
TPM1P09493 RNU2-56P-201ENST00000516826 190 ntBASIC0.28□□□□□ -2.36
TPM1P09493 RNU6-58P-201ENST00000517143 103 ntBASIC0.28□□□□□ -2.36
TPM1P09493 SCOCP1-201ENST00000554676 349 ntBASIC0.28□□□□□ -2.36
TPM1P09493 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.28□□□□□ -2.36
TPM1P09493 AC243829.3-201ENST00000622177 108 ntBASIC0.28□□□□□ -2.36
TPM1P09493 AC068787.1-201ENST00000623908 691 ntBASIC0.28□□□□□ -2.36
TPM1P09493 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
TPM1P09493 MIR103A2-201ENST00000362154 78 ntBASIC0.27□□□□□ -2.37
TPM1P09493 Y_RNA.100-201ENST00000363141 102 ntBASIC0.27□□□□□ -2.37
TPM1P09493 SNORA36.2-201ENST00000384004 127 ntBASIC0.27□□□□□ -2.37
TPM1P09493 RNA5SP222-201ENST00000411039 105 ntBASIC0.27□□□□□ -2.37
TPM1P09493 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.27□□□□□ -2.37
TPM1P09493 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.27□□□□□ -2.37
TPM1P09493 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.27□□□□□ -2.37
TPM1P09493 AC067940.1-201ENST00000458411 300 ntBASIC0.27□□□□□ -2.37
TPM1P09493 AP000870.1-201ENST00000472927 406 ntBASIC0.27□□□□□ -2.37
TPM1P09493 AP003716.2-201ENST00000528260 108 ntBASIC0.27□□□□□ -2.37
TPM1P09493 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.27□□□□□ -2.37
TPM1P09493 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
TPM1P09493 AC011458.1-201ENST00000604034 617 ntBASIC0.27□□□□□ -2.37
TPM1P09493 AC087683.2-201ENST00000611384 326 ntBASIC0.27□□□□□ -2.37
TPM1P09493 AL359757.2-201ENST00000624309 274 ntBASIC0.27□□□□□ -2.37
TPM1P09493 AC006435.5-201ENST00000624486 112 ntBASIC0.27□□□□□ -2.37
TPM1P09493 FER-210ENST00000628534 558 ntTSL 5 BASIC0.27□□□□□ -2.37
TPM1P09493 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
TPM1P09493 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
TPM1P09493 SNORD87-201ENST00000364849 89 ntBASIC0.26□□□□□ -2.37
TPM1P09493 RNU6-793P-201ENST00000384233 104 ntBASIC0.26□□□□□ -2.37
TPM1P09493 RNU6-517P-201ENST00000384362 110 ntBASIC0.26□□□□□ -2.37
TPM1P09493 MIR562-201ENST00000384894 95 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms