Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 uc_338.11-201ENST00000619132 160 ntBASIC-0.11□□□□□ -2.43
CXCL1P09341 AL031667.3-201ENST00000620124 655 ntBASIC-0.11□□□□□ -2.43
CXCL1P09341 AC009878.1-201ENST00000621819 340 ntBASIC-0.11□□□□□ -2.43
CXCL1P09341 MIR1-1-201ENST00000362147 71 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 MIR18A-201ENST00000362310 71 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 SNORA20.2-201ENST00000383922 131 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CXCL1P09341 MIR1185-2-201ENST00000408687 86 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.12□□□□□ -2.43
CXCL1P09341 RNU6-863P-201ENST00000515989 104 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 RNA5SP436-201ENST00000516020 115 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 RNA5SP227-201ENST00000516184 113 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 SNORA62.5-201ENST00000516634 120 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 RNA5SP454-201ENST00000517231 127 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
CXCL1P09341 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.12□□□□□ -2.43
CXCL1P09341 MIR4775-201ENST00000581168 75 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 BNIP3P39-201ENST00000601077 554 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 AC007742.2-201ENST00000618226 398 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 MIR6734-201ENST00000621166 68 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 AC013437.2-201ENST00000639587 677 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 AC073544.1-201ENST00000600110 1595 ntBASIC-0.12□□□□□ -2.43
CXCL1P09341 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 RNU6-227P-201ENST00000362865 103 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 RNU6-833P-201ENST00000363486 107 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 SNORD114-9-201ENST00000364370 72 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 RNU6-660P-201ENST00000364566 109 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.13□□□□□ -2.43
CXCL1P09341 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.13□□□□□ -2.43
CXCL1P09341 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.13□□□□□ -2.43
CXCL1P09341 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.13□□□□□ -2.43
CXCL1P09341 EPS15P1-201ENST00000448836 336 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.13□□□□□ -2.43
CXCL1P09341 AC010469.2-201ENST00000496412 480 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.13□□□□□ -2.43
CXCL1P09341 RNU4-77P-201ENST00000516692 156 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 AC090572.1-201ENST00000519251 160 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 AC027288.2-201ENST00000553028 243 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 FRG2DP-202ENST00000566967 323 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 MIR4290-201ENST00000583807 95 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 AL139418.1-201ENST00000613613 177 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 AC006435.5-201ENST00000624486 112 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 SCARNA4-201ENST00000629045 128 ntBASIC-0.13□□□□□ -2.43
CXCL1P09341 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.14□□□□□ -2.43
CXCL1P09341 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 MIR454-201ENST00000390180 115 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 SNORA40.8-201ENST00000411034 126 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.14□□□□□ -2.43
CXCL1P09341 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.14□□□□□ -2.43
CXCL1P09341 MRPS10P1-201ENST00000448483 130 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 ELOCP24-201ENST00000456370 334 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 RPS29P27-201ENST00000463711 170 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 RNU2-56P-201ENST00000516826 190 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 AP003072.2-201ENST00000527756 676 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 MIR4300-201ENST00000581016 96 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 SNORA4-201ENST00000584302 138 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 MIR4438-201ENST00000585271 93 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 SNORD11B-201ENST00000607707 90 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 AC022709.1-201ENST00000615967 87 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 uc_338.34-201ENST00000617467 174 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 AC005592.1-201ENST00000566527 1640 ntBASIC-0.14□□□□□ -2.43
CXCL1P09341 MTND4P4-201ENST00000439033 1366 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 SNORA25.3-201ENST00000363205 127 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 SNORD70.1-201ENST00000391007 85 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.15□□□□□ -2.43
CXCL1P09341 SNORD27.1-201ENST00000516319 72 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 RNU6-612P-201ENST00000516909 102 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 RNU6-341P-201ENST00000516973 96 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 RNU6-410P-201ENST00000517006 107 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.15□□□□□ -2.43
CXCL1P09341 AGGF1P4-201ENST00000568249 801 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 RMST_2.1-201ENST00000617263 136 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 AC010487.4-201ENST00000637027 61 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 AC099654.13-201ENST00000639774 207 ntBASIC-0.15□□□□□ -2.43
CXCL1P09341 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 RNA5SP48-201ENST00000363969 126 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 MIR891A-201ENST00000401237 79 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 SNORD71-201ENST00000411292 86 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.16□□□□□ -2.44
CXCL1P09341 AC079781.2-201ENST00000446424 169 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 HSFY5P-201ENST00000453726 309 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 RNU7-182P-201ENST00000459009 62 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 HMGN2P26-201ENST00000463169 339 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 GMFBP1-201ENST00000467831 427 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 AC093534.1-201ENST00000504977 132 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 RNU6-58P-201ENST00000517143 103 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 AP002004.2-201ENST00000531656 154 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 AC005771.1-201ENST00000585581 349 ntBASIC-0.16□□□□□ -2.44
CXCL1P09341 AL162730.1-201ENST00000605734 292 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms