Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MTND3P2-201ENST00000438452 342 ntBASIC2.05□□□□□ -2.08
CD48P09326 snoU13.15-201ENST00000459407 104 ntBASIC2.05□□□□□ -2.08
CD48P09326 AC140059.1-201ENST00000489238 361 ntBASIC2.05□□□□□ -2.08
CD48P09326 CYCSP23-201ENST00000519781 313 ntBASIC2.05□□□□□ -2.08
CD48P09326 COX6CP5-201ENST00000527162 228 ntBASIC2.05□□□□□ -2.08
CD48P09326 AC018630.3-201ENST00000542637 96 ntBASIC2.05□□□□□ -2.08
CD48P09326 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.05□□□□□ -2.08
CD48P09326 MIR3199-1-201ENST00000582434 88 ntBASIC2.05□□□□□ -2.08
CD48P09326 AL390123.1-201ENST00000603216 237 ntBASIC2.05□□□□□ -2.08
CD48P09326 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.05□□□□□ -2.08
CD48P09326 MIR5739-201ENST00000619803 80 ntBASIC2.05□□□□□ -2.08
CD48P09326 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CD48P09326 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.05□□□□□ -2.08
CD48P09326 ZNF204P-201ENST00000416749 2397 ntBASIC2.05□□□□□ -2.08
CD48P09326 Y_RNA.152-201ENST00000363578 100 ntBASIC2.04□□□□□ -2.08
CD48P09326 Y_RNA.458-201ENST00000384240 102 ntBASIC2.04□□□□□ -2.08
CD48P09326 MIR218-1-201ENST00000384999 110 ntBASIC2.04□□□□□ -2.08
CD48P09326 MRPL35P1-201ENST00000404272 572 ntBASIC2.04□□□□□ -2.08
CD48P09326 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.04□□□□□ -2.08
CD48P09326 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.04□□□□□ -2.08
CD48P09326 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.04□□□□□ -2.08
CD48P09326 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.04□□□□□ -2.08
CD48P09326 AC007395.1-201ENST00000451333 677 ntBASIC2.04□□□□□ -2.08
CD48P09326 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.04□□□□□ -2.08
CD48P09326 snoU13.23-201ENST00000458863 104 ntBASIC2.04□□□□□ -2.08
CD48P09326 AC090515.1-201ENST00000465295 476 ntBASIC2.04□□□□□ -2.08
CD48P09326 AC010655.3-201ENST00000478818 450 ntBASIC2.04□□□□□ -2.08
CD48P09326 RPS29P21-201ENST00000496272 170 ntBASIC2.04□□□□□ -2.08
CD48P09326 AC010469.2-201ENST00000496412 480 ntBASIC2.04□□□□□ -2.08
CD48P09326 AC023141.11-201ENST00000508864 202 ntBASIC2.04□□□□□ -2.08
CD48P09326 AL670379.2-201ENST00000604983 252 ntBASIC2.04□□□□□ -2.08
CD48P09326 TCL6_2.1-201ENST00000615162 119 ntBASIC2.04□□□□□ -2.08
CD48P09326 U6.92-201ENST00000636464 89 ntBASIC2.04□□□□□ -2.08
CD48P09326 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CD48P09326 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CD48P09326 RNU6-873P-201ENST00000363833 107 ntBASIC2.03□□□□□ -2.08
CD48P09326 RNU6-879P-201ENST00000364328 108 ntBASIC2.03□□□□□ -2.08
CD48P09326 MIR627-201ENST00000384979 97 ntBASIC2.03□□□□□ -2.08
CD48P09326 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CD48P09326 RNU6-1109P-201ENST00000391187 107 ntBASIC2.03□□□□□ -2.08
CD48P09326 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
CD48P09326 RNU2-20P-201ENST00000410425 191 ntBASIC2.03□□□□□ -2.08
CD48P09326 RPEP5-201ENST00000441137 268 ntBASIC2.03□□□□□ -2.08
CD48P09326 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.03□□□□□ -2.08
CD48P09326 AC067942.3-201ENST00000512025 362 ntBASIC2.03□□□□□ -2.08
CD48P09326 Y_RNA.676-201ENST00000516393 96 ntBASIC2.03□□□□□ -2.08
CD48P09326 SNORA25.14-201ENST00000516481 132 ntBASIC2.03□□□□□ -2.08
CD48P09326 RNU6-344P-201ENST00000516635 111 ntBASIC2.03□□□□□ -2.08
CD48P09326 Y_RNA.713-201ENST00000517013 96 ntBASIC2.03□□□□□ -2.08
CD48P09326 RNU6-586P-201ENST00000517265 104 ntBASIC2.03□□□□□ -2.08
CD48P09326 AC093023.1-201ENST00000547375 507 ntBASIC2.03□□□□□ -2.08
CD48P09326 MIR5695-201ENST00000579717 85 ntBASIC2.03□□□□□ -2.08
CD48P09326 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
CD48P09326 AC010999.1-201ENST00000611856 324 ntBASIC2.03□□□□□ -2.08
CD48P09326 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.03□□□□□ -2.08
CD48P09326 AC008121.3-201ENST00000618726 433 ntBASIC2.03□□□□□ -2.08
CD48P09326 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CD48P09326 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
CD48P09326 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.03□□□□□ -2.08
CD48P09326 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CD48P09326 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CD48P09326 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.03□□□□□ -2.09
CD48P09326 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CD48P09326 AC131280.1-202ENST00000624067 4211 ntBASIC2.02□□□□□ -2.09
CD48P09326 Y_RNA.179-201ENST00000363844 90 ntBASIC2.02□□□□□ -2.09
CD48P09326 Y_RNA.214-201ENST00000364201 112 ntBASIC2.02□□□□□ -2.09
CD48P09326 SET-203ENST00000372688 801 ntTSL 2 BASIC2.02□□□□□ -2.09
CD48P09326 Y_RNA.471-201ENST00000384312 102 ntBASIC2.02□□□□□ -2.09
CD48P09326 RNU6-1274P-201ENST00000384557 107 ntBASIC2.02□□□□□ -2.09
CD48P09326 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CD48P09326 RNU6-220P-201ENST00000390919 107 ntBASIC2.02□□□□□ -2.09
CD48P09326 SNORD78.2-201ENST00000391076 69 ntBASIC2.02□□□□□ -2.09
CD48P09326 RPL21P1-201ENST00000399532 476 ntBASIC2.02□□□□□ -2.09
CD48P09326 AL079342.1-201ENST00000401460 267 ntBASIC2.02□□□□□ -2.09
CD48P09326 SNORD12B-201ENST00000410433 91 ntBASIC2.02□□□□□ -2.09
CD48P09326 Y_RNA.597-201ENST00000410463 100 ntBASIC2.02□□□□□ -2.09
CD48P09326 AL161788.1-201ENST00000441805 169 ntBASIC2.02□□□□□ -2.09
CD48P09326 IPO7P1-201ENST00000442031 636 ntBASIC2.02□□□□□ -2.09
CD48P09326 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.02□□□□□ -2.09
CD48P09326 CYP2C59P-201ENST00000457790 269 ntBASIC2.02□□□□□ -2.09
CD48P09326 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.02□□□□□ -2.09
CD48P09326 MTCO2P24-201ENST00000515611 426 ntBASIC2.02□□□□□ -2.09
CD48P09326 AC131281.1-201ENST00000522984 164 ntBASIC2.02□□□□□ -2.09
CD48P09326 DEFB131C-201ENST00000528817 165 ntBASIC2.02□□□□□ -2.09
CD48P09326 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.02□□□□□ -2.09
CD48P09326 DEFB122-202ENST00000569013 197 ntBASIC2.02□□□□□ -2.09
CD48P09326 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.02□□□□□ -2.09
CD48P09326 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.02□□□□□ -2.09
CD48P09326 AC240442.1-201ENST00000616055 283 ntBASIC2.02□□□□□ -2.09
CD48P09326 AC005562.2-201ENST00000618264 111 ntBASIC2.02□□□□□ -2.09
CD48P09326 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
CD48P09326 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CD48P09326 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CD48P09326 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
CD48P09326 RNA5SP361-201ENST00000362686 118 ntBASIC2.01□□□□□ -2.09
CD48P09326 RNU6-1309P-201ENST00000363305 108 ntBASIC2.01□□□□□ -2.09
CD48P09326 Y_RNA.183-201ENST00000363882 113 ntBASIC2.01□□□□□ -2.09
CD48P09326 RNU6-793P-201ENST00000384233 104 ntBASIC2.01□□□□□ -2.09
CD48P09326 SNORA12-201ENST00000391162 147 ntBASIC2.01□□□□□ -2.09
CD48P09326 RNU6-130P-201ENST00000411112 103 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms