Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 USP9YP16-201ENST00000430287 407 ntBASIC1.64□□□□□ -2.15
VIMP08670 AL353997.1-201ENST00000432936 108 ntBASIC1.64□□□□□ -2.15
VIMP08670 AC069257.2-201ENST00000441819 155 ntBASIC1.64□□□□□ -2.15
VIMP08670 MTND3P10-201ENST00000450967 341 ntBASIC1.64□□□□□ -2.15
VIMP08670 NDUFB4P10-201ENST00000452541 359 ntBASIC1.64□□□□□ -2.15
VIMP08670 USP9YP23-201ENST00000455085 407 ntBASIC1.64□□□□□ -2.15
VIMP08670 RPL26P26-201ENST00000480251 434 ntBASIC1.64□□□□□ -2.15
VIMP08670 RPL7P42-201ENST00000481005 679 ntBASIC1.64□□□□□ -2.15
VIMP08670 AC093303.1-201ENST00000514549 295 ntBASIC1.64□□□□□ -2.15
VIMP08670 RNU6-1114P-201ENST00000516022 107 ntBASIC1.64□□□□□ -2.15
VIMP08670 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.64□□□□□ -2.15
VIMP08670 MIR5701-3-201ENST00000578890 82 ntBASIC1.64□□□□□ -2.15
VIMP08670 MIR5701-1-201ENST00000585138 82 ntBASIC1.64□□□□□ -2.15
VIMP08670 AC010999.1-201ENST00000611856 324 ntBASIC1.64□□□□□ -2.15
VIMP08670 MIR5701-2-201ENST00000615634 82 ntBASIC1.64□□□□□ -2.15
VIMP08670 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VIMP08670 MTND5P16-201ENST00000460269 1703 ntBASIC1.63□□□□□ -2.15
VIMP08670 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VIMP08670 RNU6-845P-201ENST00000362578 103 ntBASIC1.63□□□□□ -2.15
VIMP08670 Y_RNA.279-201ENST00000364763 95 ntBASIC1.63□□□□□ -2.15
VIMP08670 Y_RNA.482-201ENST00000384377 111 ntBASIC1.63□□□□□ -2.15
VIMP08670 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
VIMP08670 MT-TL1-201ENST00000386347 75 ntBASIC1.63□□□□□ -2.15
VIMP08670 RNU1-139P-201ENST00000391307 165 ntBASIC1.63□□□□□ -2.15
VIMP08670 MIR1267-201ENST00000408723 78 ntBASIC1.63□□□□□ -2.15
VIMP08670 RN7SKP51-201ENST00000410781 304 ntBASIC1.63□□□□□ -2.15
VIMP08670 AC010095.1-201ENST00000443543 144 ntBASIC1.63□□□□□ -2.15
VIMP08670 AC073910.1-201ENST00000445047 438 ntBASIC1.63□□□□□ -2.15
VIMP08670 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.63□□□□□ -2.15
VIMP08670 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.63□□□□□ -2.15
VIMP08670 UBE2DNL-203ENST00000474922 222 ntBASIC1.63□□□□□ -2.15
VIMP08670 AC103851.1-201ENST00000506833 274 ntBASIC1.63□□□□□ -2.15
VIMP08670 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.63□□□□□ -2.15
VIMP08670 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VIMP08670 RNY1P16-201ENST00000363063 111 ntBASIC1.62□□□□□ -2.15
VIMP08670 SNORA72.2-201ENST00000365028 127 ntBASIC1.62□□□□□ -2.15
VIMP08670 RNU6-338P-201ENST00000383888 105 ntBASIC1.62□□□□□ -2.15
VIMP08670 Y_RNA.404-201ENST00000383978 102 ntBASIC1.62□□□□□ -2.15
VIMP08670 RNU6-281P-201ENST00000384212 103 ntBASIC1.62□□□□□ -2.15
VIMP08670 RNU6-331P-201ENST00000384724 107 ntBASIC1.62□□□□□ -2.15
VIMP08670 MIR515-2-201ENST00000384883 83 ntBASIC1.62□□□□□ -2.15
VIMP08670 MIR515-1-201ENST00000384884 83 ntBASIC1.62□□□□□ -2.15
VIMP08670 MIR190B-201ENST00000401119 79 ntBASIC1.62□□□□□ -2.15
VIMP08670 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.62□□□□□ -2.15
VIMP08670 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
VIMP08670 RNA5SP481-201ENST00000516814 122 ntBASIC1.62□□□□□ -2.15
VIMP08670 AP000889.1-201ENST00000530968 660 ntBASIC1.62□□□□□ -2.15
VIMP08670 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.62□□□□□ -2.15
VIMP08670 AC093023.1-201ENST00000547375 507 ntBASIC1.62□□□□□ -2.15
VIMP08670 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
VIMP08670 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
VIMP08670 uc_338.5-201ENST00000611839 155 ntBASIC1.62□□□□□ -2.15
VIMP08670 MTND5P35-201ENST00000557537 1720 ntBASIC1.62□□□□□ -2.15
VIMP08670 SNORA70B-201ENST00000384210 135 ntBASIC1.61□□□□□ -2.15
VIMP08670 RNA5SP213-201ENST00000391031 106 ntBASIC1.61□□□□□ -2.15
VIMP08670 RNU6-700P-201ENST00000391043 107 ntBASIC1.61□□□□□ -2.15
VIMP08670 JTBP1-201ENST00000441314 247 ntBASIC1.61□□□□□ -2.15
VIMP08670 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.61□□□□□ -2.15
VIMP08670 snoU13.9-201ENST00000458927 103 ntBASIC1.61□□□□□ -2.15
VIMP08670 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.61□□□□□ -2.15
VIMP08670 Y_RNA.683-201ENST00000516508 93 ntBASIC1.61□□□□□ -2.15
VIMP08670 AC105029.1-201ENST00000520250 669 ntBASIC1.61□□□□□ -2.15
VIMP08670 AL121579.1-201ENST00000555129 305 ntBASIC1.61□□□□□ -2.15
VIMP08670 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.61□□□□□ -2.15
VIMP08670 AC122108.2-201ENST00000611946 526 ntBASIC1.61□□□□□ -2.15
VIMP08670 PISRT1.1-201ENST00000616930 107 ntBASIC1.61□□□□□ -2.15
VIMP08670 MIR6852-201ENST00000621699 66 ntBASIC1.61□□□□□ -2.15
VIMP08670 AC095038.3-201ENST00000634439 195 ntBASIC1.61□□□□□ -2.15
VIMP08670 AC100821.1-201ENST00000523153 2479 ntBASIC1.61□□□□□ -2.15
VIMP08670 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
VIMP08670 RNU6-874P-201ENST00000362390 105 ntBASIC1.6□□□□□ -2.15
VIMP08670 SNORA4.2-201ENST00000365313 147 ntBASIC1.6□□□□□ -2.15
VIMP08670 RNA5SP323-201ENST00000391094 133 ntBASIC1.6□□□□□ -2.15
VIMP08670 RNU6-1001P-201ENST00000411265 100 ntBASIC1.6□□□□□ -2.15
VIMP08670 RN7SKP101-201ENST00000411376 320 ntBASIC1.6□□□□□ -2.15
VIMP08670 PDCL2P1-201ENST00000419302 352 ntBASIC1.6□□□□□ -2.15
VIMP08670 MTCYBP10-201ENST00000424905 650 ntBASIC1.6□□□□□ -2.15
VIMP08670 MTND4P18-201ENST00000447010 465 ntBASIC1.6□□□□□ -2.15
VIMP08670 RNU7-87P-201ENST00000459343 62 ntBASIC1.6□□□□□ -2.15
VIMP08670 MTND4P17-201ENST00000470444 350 ntBASIC1.6□□□□□ -2.15
VIMP08670 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.6□□□□□ -2.15
VIMP08670 AC091144.1-201ENST00000519573 138 ntBASIC1.6□□□□□ -2.15
VIMP08670 AL160236.1-201ENST00000556317 195 ntBASIC1.6□□□□□ -2.15
VIMP08670 FRG2DP-202ENST00000566967 323 ntBASIC1.6□□□□□ -2.15
VIMP08670 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.6□□□□□ -2.15
VIMP08670 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
VIMP08670 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
VIMP08670 Y_RNA.364-201ENST00000365532 101 ntBASIC1.59□□□□□ -2.15
VIMP08670 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.59□□□□□ -2.15
VIMP08670 SNORA75.4-201ENST00000391278 119 ntBASIC1.59□□□□□ -2.15
VIMP08670 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.59□□□□□ -2.15
VIMP08670 EIF1P2-201ENST00000428233 350 ntBASIC1.59□□□□□ -2.15
VIMP08670 FTH1P12-201ENST00000432137 551 ntBASIC1.59□□□□□ -2.15
VIMP08670 HSPE1P24-201ENST00000450782 238 ntBASIC1.59□□□□□ -2.15
VIMP08670 snoU13.27-201ENST00000459278 104 ntBASIC1.59□□□□□ -2.15
VIMP08670 TRBV12-1-201ENST00000479785 344 ntBASIC1.59□□□□□ -2.15
VIMP08670 AL163195.1-201ENST00000496941 348 ntBASIC1.59□□□□□ -2.15
VIMP08670 AC116353.2-201ENST00000505332 712 ntBASIC1.59□□□□□ -2.15
VIMP08670 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.59□□□□□ -2.15
VIMP08670 SCARNA16.2-201ENST00000516520 172 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms