Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RNU6-595P-201ENST00000363944 107 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 RNU6-192P-201ENST00000391253 100 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 FGF7P8-201ENST00000402994 292 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 MIR548F5-201ENST00000408421 86 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 AC073910.1-201ENST00000445047 438 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 AC112492.4-201ENST00000456549 352 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 RN7SKP210-201ENST00000459176 261 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 AC025647.1-201ENST00000517879 253 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 AK6P2-201ENST00000549020 471 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 HSBP1P1-201ENST00000555205 166 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 MIR5695-201ENST00000579717 85 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.5□□□□□ -2.17
SFTPBP07988 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.5□□□□□ -2.17
SFTPBP07988 AC060780.3-201ENST00000589464 80 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 AL355802.3-201ENST00000607571 545 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.5□□□□□ -2.17
SFTPBP07988 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.5□□□□□ -2.17
SFTPBP07988 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
SFTPBP07988 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SFTPBP07988 AC100821.1-201ENST00000523153 2479 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SFTPBP07988 Y_RNA.4-201ENST00000362333 112 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNU6-137P-201ENST00000363680 108 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNU6-280P-201ENST00000364145 104 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 SNORA4.2-201ENST00000365313 147 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 MIR10B-201ENST00000385011 110 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNU6-360P-201ENST00000390944 104 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNU6-510P-201ENST00000391239 108 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNA5SP467-201ENST00000391274 118 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 MTND3P23-201ENST00000431980 347 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 JTBP1-201ENST00000441314 247 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 snoU13.9-201ENST00000458927 103 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNU6-221P-201ENST00000459541 99 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 AC018710.1-201ENST00000506509 158 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 AC103851.1-201ENST00000506833 274 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNU6-1146P-201ENST00000516282 102 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNA5SP481-201ENST00000516814 122 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 AC018462.2-201ENST00000605375 395 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 AC095038.3-201ENST00000634439 195 ntBASIC1.49□□□□□ -2.17
SFTPBP07988 RNU4-42P-201ENST00000364738 142 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 RNU6-793P-201ENST00000384233 104 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 RNU6-331P-201ENST00000384724 107 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 RNA5SP213-201ENST00000391031 106 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SFTPBP07988 MTND3P8-201ENST00000412909 339 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 RPS3AP52-201ENST00000435639 297 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 AC069257.2-201ENST00000441819 155 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.48□□□□□ -2.17
SFTPBP07988 AC026782.1-201ENST00000512952 449 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 RNU6-358P-201ENST00000516564 75 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 RNU6-1016P-201ENST00000516689 94 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.48□□□□□ -2.17
SFTPBP07988 AC104581.2-201ENST00000572227 430 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 MIR4498-201ENST00000577599 66 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.48□□□□□ -2.17
SFTPBP07988 MZT1P2-201ENST00000604387 248 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 AC098679.4-201ENST00000624241 654 ntBASIC1.48□□□□□ -2.17
SFTPBP07988 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SFTPBP07988 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SFTPBP07988 MIR378A-201ENST00000362177 66 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 Y_RNA.2-201ENST00000362330 96 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 Y_RNA.179-201ENST00000363844 90 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 SNORA72.2-201ENST00000365028 127 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 RNU6-1240P-201ENST00000365155 104 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 RNA5SP323-201ENST00000391094 133 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 MIR548K-201ENST00000408406 116 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 AC008134.1-201ENST00000420943 193 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 USMG5P1-201ENST00000425964 177 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.47□□□□□ -2.17
SFTPBP07988 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.47□□□□□ -2.17
SFTPBP07988 snoU13.27-201ENST00000459278 104 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 AC027575.1-201ENST00000481064 460 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.47□□□□□ -2.17
SFTPBP07988 Y_RNA.706-201ENST00000516933 99 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.47□□□□□ -2.17
SFTPBP07988 MIR8063-201ENST00000621930 81 ntBASIC1.47□□□□□ -2.17
SFTPBP07988 Y_RNA.106-201ENST00000363189 100 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 U3.8-201ENST00000363675 217 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 RNU6-271P-201ENST00000363858 105 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 RNU6-203P-201ENST00000384038 104 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 Y_RNA.490-201ENST00000384413 102 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 AL627390.1-201ENST00000396055 340 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 Y_RNA.594-201ENST00000410373 140 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 AC108667.1-201ENST00000428618 249 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 AL163540.1-201ENST00000485382 386 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.46□□□□□ -2.18
SFTPBP07988 Y_RNA.670-201ENST00000516255 105 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
SFTPBP07988 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.46□□□□□ -2.18
SFTPBP07988 AC011712.1-201ENST00000588959 234 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 AC080078.2-201ENST00000603766 501 ntBASIC1.46□□□□□ -2.18
SFTPBP07988 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 RNA5SP190-201ENST00000365222 118 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 RNU6-601P-201ENST00000384540 107 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 MIR515-2-201ENST00000384883 83 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms