Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.37□□□□□ -2.35
HLA-DQB2P05538 FGF7P1-201ENST00000582820 288 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AC245014.2-201ENST00000603689 287 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AC246785.4-201ENST00000605374 287 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AC004832.4-201ENST00000608952 331 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AL391903.3-201ENST00000612158 163 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AC022306.3-201ENST00000619930 550 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 Y_RNA.123-201ENST00000363338 102 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.36□□□□□ -2.35
HLA-DQB2P05538 RNU6-945P-201ENST00000383947 107 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 MIR487A-201ENST00000385009 80 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 CALM2P4-201ENST00000430810 426 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 MTCO2P7-201ENST00000446518 666 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 TPT1P7-201ENST00000458300 517 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 RNU7-94P-201ENST00000459576 63 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 RNU6-430P-201ENST00000517078 107 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 AP002963.1-201ENST00000530590 184 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 AC012557.2-201ENST00000605919 418 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 SNORA28-201ENST00000606769 126 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 AL096861.1-201ENST00000610899 123 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 AC009161.2-201ENST00000624626 138 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
HLA-DQB2P05538 ZNF204P-201ENST00000416749 2397 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.35□□□□□ -2.35
HLA-DQB2P05538 MIR450B-201ENST00000401182 78 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 SNORD99-201ENST00000408612 74 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 RNU2-9P-201ENST00000410194 145 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.35□□□□□ -2.35
HLA-DQB2P05538 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.35□□□□□ -2.35
HLA-DQB2P05538 SNORD11.1-201ENST00000459482 85 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
HLA-DQB2P05538 SUB1P2-201ENST00000556401 297 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 FRG2DP-202ENST00000566967 323 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 AC011458.1-201ENST00000604034 617 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 AC087683.2-201ENST00000611384 326 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 AC068787.1-201ENST00000623908 691 ntBASIC0.35□□□□□ -2.35
HLA-DQB2P05538 RNU6-297P-201ENST00000384636 107 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 SNORA40.3-201ENST00000390964 122 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 U8.16-201ENST00000391279 133 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 MIR320B2-201ENST00000408479 138 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 MIR1185-2-201ENST00000408687 86 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AC133104.1-201ENST00000429100 218 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AC104332.1-201ENST00000440471 797 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 USP9YP29-201ENST00000445112 563 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AL033528.1-201ENST00000453780 140 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AC233266.1-201ENST00000454518 96 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 MTND1P5-201ENST00000517906 940 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AC106038.2-201ENST00000520706 568 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AC027419.1-201ENST00000522976 328 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.34□□□□□ -2.36
HLA-DQB2P05538 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.34□□□□□ -2.36
HLA-DQB2P05538 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.34□□□□□ -2.36
HLA-DQB2P05538 MTND1P15-201ENST00000579262 949 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AC064836.2-201ENST00000609491 462 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 AC242852.1-201ENST00000612151 96 ntBASIC0.34□□□□□ -2.36
HLA-DQB2P05538 Y_RNA.330-201ENST00000365230 109 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
HLA-DQB2P05538 AC092423.1-201ENST00000430165 186 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.33□□□□□ -2.36
HLA-DQB2P05538 NDUFB4P10-201ENST00000452541 359 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 AL356010.1-201ENST00000456364 102 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 RNU7-180P-201ENST00000459240 63 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 U8.21-201ENST00000459536 136 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 SNORA14.1-201ENST00000516113 141 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 HIF1AP1-201ENST00000553642 175 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 SCOCP1-201ENST00000554676 349 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 AC234772.3-201ENST00000602277 528 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 SNORD11B-201ENST00000607707 90 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 AL360219.1-201ENST00000610230 366 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 AC137590.2-201ENST00000619709 240 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 OR5AK4P-201ENST00000635912 903 ntBASIC0.33□□□□□ -2.36
HLA-DQB2P05538 RNU6-181P-201ENST00000363225 107 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 Y_RNA.122-201ENST00000363331 96 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 RNU6-1317P-201ENST00000364582 104 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 RNU6-925P-201ENST00000384629 104 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
HLA-DQB2P05538 SNORD89-201ENST00000390981 114 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 BX295541.1-201ENST00000417774 250 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 AC244023.1-201ENST00000426884 112 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.32□□□□□ -2.36
HLA-DQB2P05538 LINC01399-202ENST00000458450 244 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 U7.7-201ENST00000459276 60 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 OR9P1P-201ENST00000496431 281 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 CCDC34P1-201ENST00000507441 517 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.32□□□□□ -2.36
HLA-DQB2P05538 RNU6-445P-201ENST00000516949 107 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 AC022868.1-201ENST00000517767 391 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 AC104576.1-201ENST00000524225 88 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 AK6P2-201ENST00000549020 471 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 AC023827.1-201ENST00000569247 97 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 AC242498.1-201ENST00000604134 111 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms