Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC093259.1-201ENST00000509755 300 ntBASIC1.91□□□□□ -2.1
VTNP04004 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.91□□□□□ -2.1
VTNP04004 GNAI2P1-201ENST00000541815 315 ntBASIC1.91□□□□□ -2.1
VTNP04004 AC026470.2-201ENST00000561492 181 ntBASIC1.91□□□□□ -2.1
VTNP04004 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.91□□□□□ -2.1
VTNP04004 AC007229.1-201ENST00000590455 412 ntBASIC1.91□□□□□ -2.1
VTNP04004 MIR6840-201ENST00000611937 71 ntBASIC1.91□□□□□ -2.1
VTNP04004 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.91□□□□□ -2.1
VTNP04004 BX322639.1-202ENST00000423987 2213 ntBASIC1.91□□□□□ -2.1
VTNP04004 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
VTNP04004 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
VTNP04004 AC073544.1-201ENST00000600110 1595 ntBASIC1.9□□□□□ -2.1
VTNP04004 Y_RNA.197-201ENST00000364004 102 ntBASIC1.9□□□□□ -2.11
VTNP04004 MIR10B-201ENST00000385011 110 ntBASIC1.9□□□□□ -2.11
VTNP04004 AL033519.2-201ENST00000403958 392 ntBASIC1.9□□□□□ -2.11
VTNP04004 MIR1262-201ENST00000408276 93 ntBASIC1.9□□□□□ -2.11
VTNP04004 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.9□□□□□ -2.11
VTNP04004 IPO7P1-201ENST00000442031 636 ntBASIC1.9□□□□□ -2.11
VTNP04004 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.9□□□□□ -2.11
VTNP04004 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.9□□□□□ -2.11
VTNP04004 U8.22-201ENST00000459141 133 ntBASIC1.9□□□□□ -2.11
VTNP04004 ATP5EP1-201ENST00000510257 156 ntBASIC1.9□□□□□ -2.11
VTNP04004 RNU7-4P-201ENST00000516961 62 ntBASIC1.9□□□□□ -2.11
VTNP04004 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.9□□□□□ -2.11
VTNP04004 AC144568.1-201ENST00000520139 137 ntBASIC1.9□□□□□ -2.11
VTNP04004 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.9□□□□□ -2.11
VTNP04004 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
VTNP04004 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.9□□□□□ -2.11
VTNP04004 AC090617.3-201ENST00000573670 475 ntBASIC1.9□□□□□ -2.11
VTNP04004 CYP2C61P-201ENST00000604072 290 ntBASIC1.9□□□□□ -2.11
VTNP04004 AL080274.1-201ENST00000605565 220 ntBASIC1.9□□□□□ -2.11
VTNP04004 AL596028.1-201ENST00000326971 197 ntBASIC1.89□□□□□ -2.11
VTNP04004 RNU6-280P-201ENST00000364145 104 ntBASIC1.89□□□□□ -2.11
VTNP04004 RNU6-1305P-201ENST00000364353 104 ntBASIC1.89□□□□□ -2.11
VTNP04004 Y_RNA.394-201ENST00000383942 103 ntBASIC1.89□□□□□ -2.11
VTNP04004 RNU6-308P-201ENST00000390957 107 ntBASIC1.89□□□□□ -2.11
VTNP04004 AC004866.1-201ENST00000411748 78 ntBASIC1.89□□□□□ -2.11
VTNP04004 RPS20P15-201ENST00000412792 311 ntBASIC1.89□□□□□ -2.11
VTNP04004 MTCO2P12-201ENST00000427426 682 ntBASIC1.89□□□□□ -2.11
VTNP04004 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.89□□□□□ -2.11
VTNP04004 AC099799.1-201ENST00000439809 192 ntBASIC1.89□□□□□ -2.11
VTNP04004 RNU6-1114P-201ENST00000516022 107 ntBASIC1.89□□□□□ -2.11
VTNP04004 AC093023.1-201ENST00000547375 507 ntBASIC1.89□□□□□ -2.11
VTNP04004 RRN3P3-201ENST00000549207 578 ntBASIC1.89□□□□□ -2.11
VTNP04004 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.89□□□□□ -2.11
VTNP04004 AC006157.1-201ENST00000611750 366 ntBASIC1.89□□□□□ -2.11
VTNP04004 AC087588.2-201ENST00000617667 426 ntBASIC1.89□□□□□ -2.11
VTNP04004 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.89□□□□□ -2.11
VTNP04004 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.89□□□□□ -2.11
VTNP04004 AC131280.1-202ENST00000624067 4211 ntBASIC1.88□□□□□ -2.11
VTNP04004 RNU1-76P-201ENST00000362903 159 ntBASIC1.88□□□□□ -2.11
VTNP04004 Y_RNA.179-201ENST00000363844 90 ntBASIC1.88□□□□□ -2.11
VTNP04004 SNORD115-8-201ENST00000363856 82 ntBASIC1.88□□□□□ -2.11
VTNP04004 SNORD115-38-201ENST00000365037 82 ntBASIC1.88□□□□□ -2.11
VTNP04004 MIR518A2-201ENST00000384966 87 ntBASIC1.88□□□□□ -2.11
VTNP04004 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.88□□□□□ -2.11
VTNP04004 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.88□□□□□ -2.11
VTNP04004 MTND4P28-201ENST00000426217 387 ntBASIC1.88□□□□□ -2.11
VTNP04004 AC245102.2-201ENST00000448956 180 ntBASIC1.88□□□□□ -2.11
VTNP04004 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
VTNP04004 RNU6-976P-201ENST00000516086 111 ntBASIC1.88□□□□□ -2.11
VTNP04004 AC092447.9-201ENST00000603395 144 ntBASIC1.88□□□□□ -2.11
VTNP04004 RPL17P51-201ENST00000605218 238 ntBASIC1.88□□□□□ -2.11
VTNP04004 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
VTNP04004 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.88□□□□□ -2.11
VTNP04004 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.88□□□□□ -2.11
VTNP04004 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
VTNP04004 Y_RNA.5-201ENST00000362334 102 ntBASIC1.87□□□□□ -2.11
VTNP04004 Y_RNA.11-201ENST00000362375 109 ntBASIC1.87□□□□□ -2.11
VTNP04004 RNU6-1115P-201ENST00000362490 106 ntBASIC1.87□□□□□ -2.11
VTNP04004 Y_RNA.132-201ENST00000363421 102 ntBASIC1.87□□□□□ -2.11
VTNP04004 RNU6-137P-201ENST00000363680 108 ntBASIC1.87□□□□□ -2.11
VTNP04004 Y_RNA.445-201ENST00000384168 102 ntBASIC1.87□□□□□ -2.11
VTNP04004 RNU6-281P-201ENST00000384212 103 ntBASIC1.87□□□□□ -2.11
VTNP04004 MIR628-201ENST00000385229 95 ntBASIC1.87□□□□□ -2.11
VTNP04004 UBE2V1P7-201ENST00000446395 340 ntBASIC1.87□□□□□ -2.11
VTNP04004 AC009237.7-201ENST00000447357 229 ntBASIC1.87□□□□□ -2.11
VTNP04004 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.87□□□□□ -2.11
VTNP04004 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
VTNP04004 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
VTNP04004 MIR4303-201ENST00000581299 66 ntBASIC1.87□□□□□ -2.11
VTNP04004 MIR4753-201ENST00000585119 83 ntBASIC1.87□□□□□ -2.11
VTNP04004 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
VTNP04004 MZT1P2-201ENST00000604387 248 ntBASIC1.87□□□□□ -2.11
VTNP04004 AC010999.1-201ENST00000611856 324 ntBASIC1.87□□□□□ -2.11
VTNP04004 Y_RNA.80-201ENST00000362996 102 ntBASIC1.86□□□□□ -2.11
VTNP04004 Y_RNA.138-201ENST00000363462 102 ntBASIC1.86□□□□□ -2.11
VTNP04004 SNORD87-201ENST00000364849 89 ntBASIC1.86□□□□□ -2.11
VTNP04004 SNORD31B-201ENST00000364977 69 ntBASIC1.86□□□□□ -2.11
VTNP04004 RNU6-245P-201ENST00000384020 107 ntBASIC1.86□□□□□ -2.11
VTNP04004 RNU6-418P-201ENST00000384035 107 ntBASIC1.86□□□□□ -2.11
VTNP04004 RNU6-793P-201ENST00000384233 104 ntBASIC1.86□□□□□ -2.11
VTNP04004 Y_RNA.485-201ENST00000384395 102 ntBASIC1.86□□□□□ -2.11
VTNP04004 MIR17-201ENST00000385012 84 ntBASIC1.86□□□□□ -2.11
VTNP04004 MIR29C-201ENST00000385231 88 ntBASIC1.86□□□□□ -2.11
VTNP04004 Y_RNA.592-201ENST00000410274 109 ntBASIC1.86□□□□□ -2.11
VTNP04004 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
VTNP04004 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
VTNP04004 RNU6-1001P-201ENST00000411265 100 ntBASIC1.86□□□□□ -2.11
VTNP04004 SRIP3-201ENST00000413200 219 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms