Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC026371.1-201ENST00000551867 419 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.73□□□□□ -2.29
TRGV3P03979 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.73□□□□□ -2.29
TRGV3P03979 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.73□□□□□ -2.29
TRGV3P03979 AL022345.2-201ENST00000606307 135 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 U6.73-201ENST00000619194 103 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 MIR8054-201ENST00000620877 86 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 AL513423.1-201ENST00000621695 132 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 AC078883.4-201ENST00000623218 367 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 AC090582.1-201ENST00000636321 199 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 MIR3974-201ENST00000637126 96 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 AC068137.3-201ENST00000639191 341 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 OR4G1P-203ENST00000641984 1631 ntBASIC0.73□□□□□ -2.29
TRGV3P03979 ELL2P3-201ENST00000457883 1602 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 RNU6-254P-201ENST00000363377 107 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 U3.8-201ENST00000363675 217 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 RNU4-9P-201ENST00000364951 139 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 Y_RNA.359-201ENST00000365498 102 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 RNU6-1080P-201ENST00000383982 107 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 MIR19B1-201ENST00000384829 87 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.72□□□□□ -2.29
TRGV3P03979 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.72□□□□□ -2.29
TRGV3P03979 AC010154.1-201ENST00000425857 269 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 RAB28P5-201ENST00000427490 651 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 DYNLT3P2-201ENST00000442517 295 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 RNU6-58P-201ENST00000517143 103 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 SUMO2P16-201ENST00000519475 264 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.72□□□□□ -2.29
TRGV3P03979 CBX3P8-201ENST00000532412 525 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 AK6P2-201ENST00000549020 471 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 AC006362.1-201ENST00000567392 174 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 MIR5695-201ENST00000579717 85 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.72□□□□□ -2.29
TRGV3P03979 AC022432.1-201ENST00000595739 310 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 BX284668.6-201ENST00000606899 438 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 AP000770.2-201ENST00000623694 100 ntBASIC0.72□□□□□ -2.29
TRGV3P03979 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.72□□□□□ -2.29
TRGV3P03979 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRGV3P03979 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.72□□□□□ -2.29
TRGV3P03979 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.71□□□□□ -2.3
TRGV3P03979 MIR222-201ENST00000384992 110 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 MIR532-201ENST00000385025 91 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 RNU6-440P-201ENST00000390882 105 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 MRPL42P3-201ENST00000401492 326 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 RNU6-1054P-201ENST00000411293 104 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.71□□□□□ -2.3
TRGV3P03979 NDUFA5P4-201ENST00000436704 385 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.71□□□□□ -2.3
TRGV3P03979 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.71□□□□□ -2.3
TRGV3P03979 RNU7-187P-201ENST00000458985 68 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.71□□□□□ -2.3
TRGV3P03979 RNU7-99P-201ENST00000516271 62 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 RNU7-40P-201ENST00000516397 64 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AC027288.2-201ENST00000553028 243 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AL137100.2-201ENST00000555786 315 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.71□□□□□ -2.3
TRGV3P03979 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.71□□□□□ -2.3
TRGV3P03979 AL162424.1-201ENST00000602325 221 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AL513534.2-201ENST00000603836 250 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AL158209.2-201ENST00000619266 216 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.71□□□□□ -2.3
TRGV3P03979 AC097520.1-201ENST00000624435 385 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 AC068647.2-201ENST00000637380 353 ntBASIC0.71□□□□□ -2.3
TRGV3P03979 MTND5P26-201ENST00000426018 1752 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
TRGV3P03979 RNU6-1085P-201ENST00000363576 107 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 Y_RNA.409-201ENST00000383990 98 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 RNU6-505P-201ENST00000384427 107 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 MIR653-201ENST00000385279 96 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TRGV3P03979 AC245047.3-201ENST00000429428 127 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.7□□□□□ -2.3
TRGV3P03979 ERLEC1P1-201ENST00000433806 578 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AC005002.2-201ENST00000438228 269 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.7□□□□□ -2.3
TRGV3P03979 AL353572.1-201ENST00000442490 417 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AC092991.1-201ENST00000477176 376 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AC010486.3-201ENST00000511602 785 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 Y_RNA.693-201ENST00000516641 110 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 RNU1-117P-201ENST00000517041 158 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 RNA5SP454-201ENST00000517231 127 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.7□□□□□ -2.3
TRGV3P03979 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.7□□□□□ -2.3
TRGV3P03979 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AC245008.1-201ENST00000608123 476 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 MIR6857-201ENST00000613267 93 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AC012676.2-201ENST00000619258 186 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 AL359880.1-201ENST00000621879 266 ntBASIC0.7□□□□□ -2.3
TRGV3P03979 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TRGV3P03979 MIR153-2-201ENST00000385225 87 ntBASIC0.69□□□□□ -2.3
TRGV3P03979 MIR660-201ENST00000385235 97 ntBASIC0.69□□□□□ -2.3
TRGV3P03979 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.69□□□□□ -2.3
TRGV3P03979 DAP3P1-201ENST00000441522 278 ntBASIC0.69□□□□□ -2.3
TRGV3P03979 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.69□□□□□ -2.3
TRGV3P03979 RNU7-94P-201ENST00000459576 63 ntBASIC0.69□□□□□ -2.3
TRGV3P03979 AC083904.1-201ENST00000487828 231 ntBASIC0.69□□□□□ -2.3
TRGV3P03979 TRBVA-201ENST00000498804 316 ntBASIC0.69□□□□□ -2.3
TRGV3P03979 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.69□□□□□ -2.3
TRGV3P03979 MTCO2P30-201ENST00000503662 364 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms