Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RPS24P1-201ENST00000438550 371 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 AC002542.1-201ENST00000440683 193 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 MTND2P20-201ENST00000440805 661 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 AC005042.3-201ENST00000453230 174 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 RNU6-948P-201ENST00000516374 107 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 AL139022.2-201ENST00000606934 443 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 AC005520.5-201ENST00000613926 164 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 AC099654.8-201ENST00000637757 681 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 SNORD56.4-201ENST00000363883 71 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 snoZ40.1-201ENST00000364540 72 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 RNU6-726P-201ENST00000364680 107 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 SNORD51.1-201ENST00000365405 77 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 RNU6-613P-201ENST00000410412 108 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.42□□□□□ -2.48
SPTA1P02549 AC005002.2-201ENST00000438228 269 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AL392103.1-201ENST00000447000 198 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC026414.1-201ENST00000504046 698 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.42□□□□□ -2.48
SPTA1P02549 RNU4-49P-201ENST00000516080 140 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 OR8K2P-201ENST00000524645 927 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.42□□□□□ -2.48
SPTA1P02549 AL357080.1-201ENST00000617394 239 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC024940.5-201ENST00000622889 474 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AL391099.1-201ENST00000624635 187 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 RNU6-815P-201ENST00000384080 113 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 RNU6-127P-201ENST00000390897 107 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.42□□□□□ -2.48
SPTA1P02549 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.42□□□□□ -2.48
SPTA1P02549 USP9YP11-201ENST00000427537 717 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 MTND4P19-201ENST00000446659 478 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC074290.1-201ENST00000448883 135 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC007215.1-201ENST00000464893 276 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC022616.3-201ENST00000523940 148 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 DEFB131C-201ENST00000528817 165 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC023538.1-201ENST00000534576 736 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC090517.1-201ENST00000569307 266 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 MIR3666-201ENST00000607845 111 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 AC026585.1-201ENST00000619582 524 ntBASIC-0.42□□□□□ -2.48
SPTA1P02549 RNU6-396P-201ENST00000365369 105 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 RNU6-946P-201ENST00000383878 107 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 MIR301A-201ENST00000385261 86 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 MIR644A-201ENST00000385262 94 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 RNU2-8P-201ENST00000410727 190 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 HSFY7P-201ENST00000432672 318 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 HSFY8P-201ENST00000437934 318 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 AC009237.7-201ENST00000447357 229 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.43□□□□□ -2.48
SPTA1P02549 RNU7-94P-201ENST00000459576 63 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 AC113347.3-201ENST00000509113 148 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.43□□□□□ -2.48
SPTA1P02549 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
SPTA1P02549 AC021451.1-201ENST00000523498 1129 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.43□□□□□ -2.48
SPTA1P02549 AC231657.1-201ENST00000624313 397 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 SNORD98-201ENST00000636377 67 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
SPTA1P02549 SNORA8.2-201ENST00000384372 139 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 RNU6-417P-201ENST00000384712 107 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 MIR558-201ENST00000384920 94 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 SNORA75.1-201ENST00000391130 148 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 TPTE2P1-204ENST00000435256 593 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.43□□□□□ -2.48
SPTA1P02549 AC026782.1-201ENST00000512952 449 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.43□□□□□ -2.48
SPTA1P02549 AC011921.3-201ENST00000605540 361 ntBASIC-0.43□□□□□ -2.48
SPTA1P02549 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 MIR526A1-201ENST00000384897 85 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AC004866.1-201ENST00000411748 78 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 MTND4P24-201ENST00000424002 397 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPTA1P02549 MTND4P15-201ENST00000437913 1033 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 SNORA43.2-201ENST00000516652 128 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 RNU6-897P-201ENST00000517135 105 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPTA1P02549 DEFB108A-201ENST00000530110 222 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPTA1P02549 MIR4300-201ENST00000581016 96 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AC068792.1-201ENST00000621354 417 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 uc_338.36-201ENST00000622331 158 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
SPTA1P02549 SNORD68-201ENST00000363214 84 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 U3.4-201ENST00000363352 213 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 RNY4P7-201ENST00000364600 96 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 U8.16-201ENST00000391279 133 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 PCNPP3-201ENST00000393579 471 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AL031779.1-201ENST00000415663 330 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AL590623.1-201ENST00000427864 105 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPTA1P02549 AL122001.1-201ENST00000457027 370 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AC079382.1-201ENST00000493346 557 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms