Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 Y_RNA.453-201ENST00000384223 109 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 MIR764-201ENST00000390811 85 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RNU6-159P-201ENST00000391080 106 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RPL21P1-201ENST00000399532 476 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RNU6-174P-201ENST00000410406 106 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AC243428.1-201ENST00000421099 264 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RPS27P16-201ENST00000425758 201 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 USP9YP30-201ENST00000430729 455 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AL135790.2-201ENST00000437701 267 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AC005002.2-201ENST00000438228 269 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AC069257.2-201ENST00000441819 155 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AC091179.3-201ENST00000474761 144 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DQA1P01909 HMGN1P12-201ENST00000499125 195 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RNU6-566P-201ENST00000516790 107 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RNU6-1198P-201ENST00000516904 67 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RNU6-902P-201ENST00000517212 91 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RNA5SP454-201ENST00000517231 127 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AC019176.1-201ENST00000518519 225 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1□□□□□ -2.25
HLA-DQA1P01909 AL442163.3-201ENST00000554110 156 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 SUB1P3-201ENST00000564581 315 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 FRG2DP-202ENST00000566967 323 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1□□□□□ -2.25
HLA-DQA1P01909 AC015688.6-201ENST00000577737 104 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 MIR4298-201ENST00000584380 73 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 MIR3688-2-201ENST00000636963 87 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DQA1P01909 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1□□□□□ -2.25
HLA-DQA1P01909 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1□□□□□ -2.25
HLA-DQA1P01909 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.405-201ENST00000383979 100 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.451-201ENST00000384200 100 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 RNU6-842P-201ENST00000384269 107 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 RNU6-1215P-201ENST00000384441 102 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.524-201ENST00000384564 100 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.561-201ENST00000384694 100 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HLA-DQA1P01909 MIR1185-2-201ENST00000408687 86 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 AC004965.1-201ENST00000413033 213 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 COX6CP10-201ENST00000416832 224 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 AC010154.1-201ENST00000425857 269 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DQA1P01909 AC027119.1-201ENST00000440877 241 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 RPS27P1-201ENST00000450552 247 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DQA1P01909 RPL31P58-201ENST00000469001 379 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 AP000870.1-201ENST00000472927 406 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 AC079140.2-201ENST00000506193 142 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 RNA5SP445-201ENST00000515889 115 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 RNU4-49P-201ENST00000516080 140 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DQA1P01909 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DQA1P01909 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DQA1P01909 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DQA1P01909 AC104984.5-201ENST00000586878 94 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 MZT1P2-201ENST00000604387 248 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 AC090517.2-201ENST00000614966 680 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 MIR6128-201ENST00000615528 109 ntBASIC0.99□□□□□ -2.25
HLA-DQA1P01909 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HLA-DQA1P01909 MIR26B-201ENST00000362251 77 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 RNU1-17P-201ENST00000363022 152 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 RNU6-596P-201ENST00000365395 98 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 SNORD26-201ENST00000384147 75 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.473-201ENST00000384333 102 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.573-201ENST00000384763 105 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 MIR10B-201ENST00000385011 110 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 RNA5SP323-201ENST00000391094 133 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HLA-DQA1P01909 MRPL35P1-201ENST00000404272 572 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.98□□□□□ -2.25
HLA-DQA1P01909 MTND4LP16-201ENST00000440828 295 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 AC245517.4-201ENST00000448601 281 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 MTND1P17-201ENST00000448961 204 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 AC099513.1-201ENST00000490423 301 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.98□□□□□ -2.25
HLA-DQA1P01909 RNU7-175P-201ENST00000515915 61 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 RNU6-718P-201ENST00000516166 105 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 MIR4709-201ENST00000577272 72 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 AL929325.1-201ENST00000603096 117 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 AC022217.4-201ENST00000604389 163 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 MTND5P35-201ENST00000557537 1720 ntBASIC0.98□□□□□ -2.25
HLA-DQA1P01909 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HLA-DQA1P01909 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.157-201ENST00000363638 102 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 U3.8-201ENST00000363675 217 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 RNU6-137P-201ENST00000363680 108 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.179-201ENST00000363844 90 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 RNU6-595P-201ENST00000363944 107 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 SNORA72.2-201ENST00000365028 127 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 RNU6-793P-201ENST00000384233 104 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 RNU6-1186P-201ENST00000410429 97 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AC009161.1-201ENST00000417306 376 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 snoU13.23-201ENST00000458863 104 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.682-201ENST00000516457 100 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 SNORA31.10-201ENST00000516482 106 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 RNU1-142P-201ENST00000516682 145 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms