Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MIR1185-2-201ENST00000408687 86 ntBASIC1.27□□□□□ -2.21
MBD3O95983 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.27□□□□□ -2.21
MBD3O95983 AL163195.1-201ENST00000496941 348 ntBASIC1.27□□□□□ -2.21
MBD3O95983 AC108729.3-201ENST00000513484 108 ntBASIC1.27□□□□□ -2.21
MBD3O95983 RNU1-142P-201ENST00000516682 145 ntBASIC1.27□□□□□ -2.21
MBD3O95983 AC109635.3-201ENST00000529536 185 ntBASIC1.27□□□□□ -2.21
MBD3O95983 AC027288.2-201ENST00000553028 243 ntBASIC1.27□□□□□ -2.21
MBD3O95983 AL442163.3-201ENST00000554110 156 ntBASIC1.27□□□□□ -2.21
MBD3O95983 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.27□□□□□ -2.21
MBD3O95983 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.27□□□□□ -2.21
MBD3O95983 MIR3937-201ENST00000580135 106 ntBASIC1.27□□□□□ -2.21
MBD3O95983 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.27□□□□□ -2.21
MBD3O95983 AL359075.3-201ENST00000613288 217 ntBASIC1.27□□□□□ -2.21
MBD3O95983 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.27□□□□□ -2.21
MBD3O95983 AL078604.3-201ENST00000615580 211 ntBASIC1.27□□□□□ -2.21
MBD3O95983 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.27□□□□□ -2.21
MBD3O95983 Y_RNA.402-201ENST00000383972 102 ntBASIC1.26□□□□□ -2.21
MBD3O95983 Y_RNA.490-201ENST00000384413 102 ntBASIC1.26□□□□□ -2.21
MBD3O95983 MIR487A-201ENST00000385009 80 ntBASIC1.26□□□□□ -2.21
MBD3O95983 RNU6-159P-201ENST00000391080 106 ntBASIC1.26□□□□□ -2.21
MBD3O95983 RNU6-332P-201ENST00000391193 108 ntBASIC1.26□□□□□ -2.21
MBD3O95983 MRPL35P1-201ENST00000404272 572 ntBASIC1.26□□□□□ -2.21
MBD3O95983 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.26□□□□□ -2.21
MBD3O95983 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.26□□□□□ -2.21
MBD3O95983 Y_RNA.638-201ENST00000459374 113 ntBASIC1.26□□□□□ -2.21
MBD3O95983 SNORA25.14-201ENST00000516481 132 ntBASIC1.26□□□□□ -2.21
MBD3O95983 AC004584.2-201ENST00000570407 410 ntBASIC1.26□□□□□ -2.21
MBD3O95983 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.26□□□□□ -2.21
MBD3O95983 MIR4303-201ENST00000581299 66 ntBASIC1.26□□□□□ -2.21
MBD3O95983 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
MBD3O95983 7SK.7-201ENST00000603504 247 ntBASIC1.26□□□□□ -2.21
MBD3O95983 BNIP3P10-201ENST00000605360 577 ntBASIC1.26□□□□□ -2.21
MBD3O95983 AC103810.9-201ENST00000606688 112 ntBASIC1.26□□□□□ -2.21
MBD3O95983 AC103591.3-201ENST00000608684 209 ntBASIC1.26□□□□□ -2.21
MBD3O95983 AC019193.3-201ENST00000609144 554 ntBASIC1.26□□□□□ -2.21
MBD3O95983 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.26□□□□□ -2.21
MBD3O95983 AC015540.1-201ENST00000615828 501 ntBASIC1.26□□□□□ -2.21
MBD3O95983 U6.108-201ENST00000637764 58 ntBASIC1.26□□□□□ -2.21
MBD3O95983 AC068137.4-201ENST00000638485 296 ntBASIC1.26□□□□□ -2.21
MBD3O95983 RNY4P14-201ENST00000363656 96 ntBASIC1.25□□□□□ -2.21
MBD3O95983 SNORA33-201ENST00000363664 130 ntBASIC1.25□□□□□ -2.21
MBD3O95983 SNORA4.2-201ENST00000365313 147 ntBASIC1.25□□□□□ -2.21
MBD3O95983 Y_RNA.517-201ENST00000384551 106 ntBASIC1.25□□□□□ -2.21
MBD3O95983 RNA5SP323-201ENST00000391094 133 ntBASIC1.25□□□□□ -2.21
MBD3O95983 RNA5SP467-201ENST00000391274 118 ntBASIC1.25□□□□□ -2.21
MBD3O95983 RPL21P1-201ENST00000399532 476 ntBASIC1.25□□□□□ -2.21
MBD3O95983 RNA5SP118-201ENST00000410385 109 ntBASIC1.25□□□□□ -2.21
MBD3O95983 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
MBD3O95983 MTND2P22-201ENST00000444325 1033 ntBASIC1.25□□□□□ -2.21
MBD3O95983 RPS27P1-201ENST00000450552 247 ntBASIC1.25□□□□□ -2.21
MBD3O95983 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.25□□□□□ -2.21
MBD3O95983 AC245505.1-201ENST00000556398 224 ntBASIC1.25□□□□□ -2.21
MBD3O95983 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.25□□□□□ -2.21
MBD3O95983 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
MBD3O95983 AC022432.1-201ENST00000595739 310 ntBASIC1.25□□□□□ -2.21
MBD3O95983 AC016727.1-205ENST00000605437 569 ntBASIC1.25□□□□□ -2.21
MBD3O95983 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.25□□□□□ -2.21
MBD3O95983 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.24□□□□□ -2.21
MBD3O95983 MTND4P12-201ENST00000498999 1377 ntBASIC1.24□□□□□ -2.21
MBD3O95983 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
MBD3O95983 Y_RNA.9-201ENST00000362354 101 ntBASIC1.24□□□□□ -2.21
MBD3O95983 Y_RNA.338-201ENST00000365320 114 ntBASIC1.24□□□□□ -2.21
MBD3O95983 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.24□□□□□ -2.21
MBD3O95983 RNU6-331P-201ENST00000384724 107 ntBASIC1.24□□□□□ -2.21
MBD3O95983 AL590632.1-201ENST00000424289 371 ntBASIC1.24□□□□□ -2.21
MBD3O95983 Z82188.1-201ENST00000436709 154 ntBASIC1.24□□□□□ -2.21
MBD3O95983 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.24□□□□□ -2.21
MBD3O95983 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.24□□□□□ -2.21
MBD3O95983 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.24□□□□□ -2.21
MBD3O95983 AC093534.1-201ENST00000504977 132 ntBASIC1.24□□□□□ -2.21
MBD3O95983 RNU6-314P-201ENST00000516574 104 ntBASIC1.24□□□□□ -2.21
MBD3O95983 DNAJC19P9-201ENST00000555084 351 ntBASIC1.24□□□□□ -2.21
MBD3O95983 AC009033.1-201ENST00000624279 431 ntBASIC1.24□□□□□ -2.21
MBD3O95983 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.24□□□□□ -2.21
MBD3O95983 AC024614.3-201ENST00000637860 256 ntBASIC1.24□□□□□ -2.21
MBD3O95983 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
MBD3O95983 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
MBD3O95983 Y_RNA.41-201ENST00000362646 102 ntBASIC1.23□□□□□ -2.21
MBD3O95983 AC243428.1-201ENST00000421099 264 ntBASIC1.23□□□□□ -2.21
MBD3O95983 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.23□□□□□ -2.21
MBD3O95983 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.23□□□□□ -2.21
MBD3O95983 PGBD4P5-201ENST00000445958 426 ntBASIC1.23□□□□□ -2.21
MBD3O95983 RN7SKP210-201ENST00000459176 261 ntBASIC1.23□□□□□ -2.21
MBD3O95983 AL163540.1-201ENST00000485382 386 ntBASIC1.23□□□□□ -2.21
MBD3O95983 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.23□□□□□ -2.21
MBD3O95983 RNU1-117P-201ENST00000517041 158 ntBASIC1.23□□□□□ -2.21
MBD3O95983 AL137100.2-201ENST00000555786 315 ntBASIC1.23□□□□□ -2.21
MBD3O95983 U6.73-201ENST00000619194 103 ntBASIC1.23□□□□□ -2.21
MBD3O95983 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
MBD3O95983 RNU6-1252P-201ENST00000363054 104 ntBASIC1.22□□□□□ -2.21
MBD3O95983 RNU6-457P-201ENST00000363999 107 ntBASIC1.22□□□□□ -2.21
MBD3O95983 SNORA22-201ENST00000383907 134 ntBASIC1.22□□□□□ -2.21
MBD3O95983 RNU6-793P-201ENST00000384233 104 ntBASIC1.22□□□□□ -2.21
MBD3O95983 SNORA22C-201ENST00000384614 134 ntBASIC1.22□□□□□ -2.21
MBD3O95983 RNU6-541P-201ENST00000384709 110 ntBASIC1.22□□□□□ -2.21
MBD3O95983 RN7SKP200-201ENST00000410564 320 ntBASIC1.22□□□□□ -2.21
MBD3O95983 MRPL35P3-201ENST00000421557 364 ntBASIC1.22□□□□□ -2.21
MBD3O95983 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.22□□□□□ -2.21
MBD3O95983 MTCO2P7-201ENST00000446518 666 ntBASIC1.22□□□□□ -2.21
MBD3O95983 RNU7-94P-201ENST00000459576 63 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms