Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 MTCO3P18-201ENST00000440206 761 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 MTND1P1-201ENST00000445453 368 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 AL163195.1-201ENST00000496941 348 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.81□□□□□ -2.28
CPSF4O95639 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.81□□□□□ -2.28
CPSF4O95639 RNA5SP458-201ENST00000516188 119 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 RNA5SP54-201ENST00000516951 92 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 RNU6-58P-201ENST00000517143 103 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.81□□□□□ -2.28
CPSF4O95639 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.81□□□□□ -2.28
CPSF4O95639 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 AC006504.8-201ENST00000621046 635 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.81□□□□□ -2.28
CPSF4O95639 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
CPSF4O95639 Y_RNA.41-201ENST00000362646 102 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 RNY3P3-201ENST00000363816 102 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 SNORD115-8-201ENST00000363856 82 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 SNORD87-201ENST00000364849 89 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 RNU4-9P-201ENST00000364951 139 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 SNORD115-38-201ENST00000365037 82 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 RNU6-245P-201ENST00000384020 107 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 SNORA70.7-201ENST00000384159 133 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 MIR517A-201ENST00000385001 87 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CPSF4O95639 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CPSF4O95639 RNA5SP323-201ENST00000391094 133 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 RNU6-332P-201ENST00000391193 108 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 RPL21P1-201ENST00000399532 476 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF4O95639 EIF1P1-201ENST00000421436 341 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 AL445305.1-201ENST00000432577 575 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF4O95639 AL606517.2-201ENST00000442855 241 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF4O95639 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF4O95639 RNU7-34P-201ENST00000459394 64 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 RNU6-221P-201ENST00000459541 99 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 AC103851.1-201ENST00000506833 274 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 RNU6-256P-201ENST00000516747 97 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 AC024995.1-201ENST00000523014 93 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF4O95639 MIR3672-201ENST00000584290 82 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 POLR3GP2-201ENST00000588366 668 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 SNORD11B-201ENST00000607707 90 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 AL365434.2-201ENST00000607979 234 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 AF250324.2-201ENST00000608299 610 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 U6.108-201ENST00000637764 58 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 MIR1321-201ENST00000637766 79 ntBASIC0.8□□□□□ -2.28
CPSF4O95639 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CPSF4O95639 SNORD114-27-201ENST00000363766 70 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 RNU6-1090P-201ENST00000364065 94 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 SNORD115-32-201ENST00000364079 82 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 RNU4-75P-201ENST00000364621 146 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 RNU6-1240P-201ENST00000365155 104 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 Y_RNA.530-201ENST00000384587 101 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 RPL23AP36-201ENST00000413895 458 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.79□□□□□ -2.28
CPSF4O95639 AC010154.1-201ENST00000425857 269 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 DAP3P1-201ENST00000441522 278 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 MTND2P22-201ENST00000444325 1033 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 RPS26P45-201ENST00000471748 340 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 OR2A41P-201ENST00000473586 105 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 RPL30P7-201ENST00000479312 323 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 TRBVA-201ENST00000498804 316 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 SNORA25.14-201ENST00000516481 132 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 RNA5SP454-201ENST00000517231 127 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.79□□□□□ -2.28
CPSF4O95639 AK6P2-201ENST00000549020 471 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 AC027288.2-201ENST00000553028 243 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 AC024909.2-201ENST00000553035 286 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 CYP3A52P-201ENST00000563326 91 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 TPRKBP2-201ENST00000565969 475 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 AL929325.1-201ENST00000603096 117 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 snoU13.31-201ENST00000607291 104 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.79□□□□□ -2.28
CPSF4O95639 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
CPSF4O95639 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CPSF4O95639 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CPSF4O95639 Y_RNA.135-201ENST00000363439 95 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 RNU6-873P-201ENST00000363833 107 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 Y_RNA.194-201ENST00000363985 102 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 Y_RNA.212-201ENST00000364177 102 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 Y_RNA.319-201ENST00000365138 92 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 RNA5SP259-201ENST00000365541 109 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 RNU6-1065P-201ENST00000384513 106 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 Y_RNA.517-201ENST00000384551 106 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 MIR153-2-201ENST00000385225 87 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CPSF4O95639 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 Y_RNA.595-201ENST00000410403 105 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF4O95639 ZNF885P-201ENST00000420174 1098 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 AC008134.1-201ENST00000420943 193 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 SNX2P2-201ENST00000424553 323 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.78□□□□□ -2.28
CPSF4O95639 AC005002.2-201ENST00000438228 269 ntBASIC0.78□□□□□ -2.28
CPSF4O95639 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms