Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 ERLEC1P1-201ENST00000433806 578 ntBASIC1.16□□□□□ -2.22
CLDN9O95484 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.16□□□□□ -2.22
CLDN9O95484 Y_RNA.693-201ENST00000516641 110 ntBASIC1.16□□□□□ -2.22
CLDN9O95484 AL442163.3-201ENST00000554110 156 ntBASIC1.16□□□□□ -2.22
CLDN9O95484 AL512360.1-201ENST00000555346 234 ntBASIC1.16□□□□□ -2.22
CLDN9O95484 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.16□□□□□ -2.22
CLDN9O95484 AC010620.1-201ENST00000601088 1102 ntBASIC1.16□□□□□ -2.22
CLDN9O95484 AC022079.1-201ENST00000621546 602 ntBASIC1.16□□□□□ -2.22
CLDN9O95484 AL359880.1-201ENST00000621879 266 ntBASIC1.16□□□□□ -2.22
CLDN9O95484 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CLDN9O95484 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.16□□□□□ -2.22
CLDN9O95484 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLDN9O95484 RNU6-53P-201ENST00000365367 106 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AL590002.1-201ENST00000406554 418 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.15□□□□□ -2.23
CLDN9O95484 AC016909.1-201ENST00000415916 166 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 SEPT14P3-201ENST00000439401 183 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AL353572.1-201ENST00000442490 417 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AL732372.2-207ENST00000445840 183 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 SEPT14P2-201ENST00000453405 183 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.15□□□□□ -2.23
CLDN9O95484 SEPT14P4-201ENST00000513445 186 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.15□□□□□ -2.23
CLDN9O95484 AC024995.1-201ENST00000523014 93 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 FO082796.1-201ENST00000523795 183 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AL353770.2-201ENST00000620024 78 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AC124864.2-201ENST00000624736 186 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 AC068137.3-201ENST00000639191 341 ntBASIC1.15□□□□□ -2.23
CLDN9O95484 SNORD50.1-201ENST00000362987 71 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 RNU6-1252P-201ENST00000363054 104 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 Y_RNA.372-201ENST00000365599 102 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 RNU6-128P-201ENST00000383976 107 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 SNORA67.2-201ENST00000384300 149 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 AC008134.1-201ENST00000420943 193 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN9O95484 AL163195.1-201ENST00000496941 348 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 RNU6-344P-201ENST00000516635 111 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 AC025647.1-201ENST00000517879 253 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN9O95484 AL512310.8-201ENST00000550183 120 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 MIR4742-201ENST00000581069 85 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 AC010525.2-201ENST00000590920 195 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 AL929325.1-201ENST00000603096 117 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 AC080078.3-201ENST00000605407 463 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 SNORD11B-201ENST00000607707 90 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 Z99129.1-201ENST00000612510 255 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 AC009033.1-201ENST00000624279 431 ntBASIC1.14□□□□□ -2.23
CLDN9O95484 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.14□□□□□ -2.23
CLDN9O95484 RNA5SP327-201ENST00000362494 101 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 RNU6-254P-201ENST00000363377 107 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 Y_RNA.151-201ENST00000363566 112 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 SNORD114-27-201ENST00000363766 70 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 Y_RNA.373-201ENST00000365600 103 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 MIR32-201ENST00000384965 70 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 RNU6-780P-201ENST00000391030 104 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.13□□□□□ -2.23
CLDN9O95484 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN9O95484 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.13□□□□□ -2.23
CLDN9O95484 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.13□□□□□ -2.23
CLDN9O95484 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN9O95484 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.13□□□□□ -2.23
CLDN9O95484 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.13□□□□□ -2.23
CLDN9O95484 AC107401.1-201ENST00000503426 685 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 AC093852.1-201ENST00000503587 266 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 AC103851.1-201ENST00000506833 274 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN9O95484 RNA5SP54-201ENST00000516951 92 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 RNA5SP454-201ENST00000517231 127 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 MTND1P5-201ENST00000517906 940 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 AL137100.2-201ENST00000555786 315 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 MIR151B-201ENST00000584249 96 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.13□□□□□ -2.23
CLDN9O95484 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLDN9O95484 RNU6-1123P-201ENST00000362347 106 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 RNU6-1240P-201ENST00000365155 104 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 RNA5SP504-201ENST00000410676 117 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN9O95484 AC010154.1-201ENST00000425857 269 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 AL445305.1-201ENST00000432577 575 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 Z82188.1-201ENST00000436709 154 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.12□□□□□ -2.23
CLDN9O95484 AL606517.2-201ENST00000442855 241 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 AC098826.2-201ENST00000452011 651 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 AC079354.2-201ENST00000453523 154 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 PCMTD1P1-201ENST00000455560 355 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 RNU6-221P-201ENST00000459541 99 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN9O95484 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN9O95484 Y_RNA.665-201ENST00000516177 98 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 RNU6-1281P-201ENST00000516223 105 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 RNU1-142P-201ENST00000516682 145 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 Y_RNA.704-201ENST00000516851 102 ntBASIC1.12□□□□□ -2.23
CLDN9O95484 ZNF519P2-201ENST00000557032 169 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms