Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC027288.2-201ENST00000553028 243 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 AC008269.2-201ENST00000561915 1105 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 MIR5006-201ENST00000583027 110 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 RPL17P51-201ENST00000605218 238 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.24□□□□□ -2.21
CTDNEP1O95476 TCL6_2.1-201ENST00000615162 119 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 U6atac.1-201ENST00000616025 117 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 AC130454.1-201ENST00000622948 401 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 BX322639.1-202ENST00000423987 2213 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
CTDNEP1O95476 Y_RNA.67-201ENST00000362870 100 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 Y_RNA.72-201ENST00000362894 103 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 SNORD115-8-201ENST00000363856 82 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 SNORD115-32-201ENST00000364079 82 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 SNORD115-38-201ENST00000365037 82 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 RNU6-1283P-201ENST00000365314 105 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 RNU6-596P-201ENST00000365395 98 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.23□□□□□ -2.21
CTDNEP1O95476 MT-TL1-201ENST00000386347 75 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 MIR1283-1-201ENST00000408494 87 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 RNU4-14P-201ENST00000410858 122 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 RPS3AP52-201ENST00000435639 297 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.23□□□□□ -2.21
CTDNEP1O95476 AC009237.7-201ENST00000447357 229 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 snoU13.30-201ENST00000458951 104 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 HMGN2P9-201ENST00000476875 229 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 AC108729.3-201ENST00000513484 108 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 Y_RNA.670-201ENST00000516255 105 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 RNU6-58P-201ENST00000517143 103 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.23□□□□□ -2.21
CTDNEP1O95476 CBX3P8-201ENST00000532412 525 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 AK6P2-201ENST00000549020 471 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 RRN3P3-201ENST00000549207 578 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 AC026470.2-201ENST00000561492 181 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 MIR4422-201ENST00000581938 83 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
CTDNEP1O95476 AC011712.1-201ENST00000588959 234 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 AC018462.2-201ENST00000605375 395 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 snoU13.31-201ENST00000607291 104 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 MIR8074-201ENST00000615081 81 ntBASIC1.23□□□□□ -2.21
CTDNEP1O95476 Y_RNA.160-201ENST00000363677 92 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 RNU4-9P-201ENST00000364951 139 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 SNORD26-201ENST00000384147 75 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 RNU6-17P-201ENST00000384245 107 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 RNU6-18P-201ENST00000384527 107 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 AL117342.1-201ENST00000404861 406 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 Y_RNA.594-201ENST00000410373 140 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 RPL23AP36-201ENST00000413895 458 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 AC060773.1-201ENST00000421698 310 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 AL163540.1-201ENST00000485382 386 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 AC010409.1-201ENST00000487382 476 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 AC097473.1-201ENST00000508142 408 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 RNU7-30P-201ENST00000516835 62 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 UBL5P4-201ENST00000562584 236 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 SUB1P4-201ENST00000566062 339 ntBASIC1.22□□□□□ -2.21
CTDNEP1O95476 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.22□□□□□ -2.21
CTDNEP1O95476 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.22□□□□□ -2.21
CTDNEP1O95476 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CTDNEP1O95476 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CTDNEP1O95476 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 RNU6-845P-201ENST00000362578 103 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 Y_RNA.88-201ENST00000363029 99 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 RNU6-595P-201ENST00000363944 107 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 Y_RNA.404-201ENST00000383978 102 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 Y_RNA.405-201ENST00000383979 100 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 RNU6-767P-201ENST00000384132 107 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 Y_RNA.451-201ENST00000384200 100 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 RNU6-1026P-201ENST00000384465 108 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 Y_RNA.524-201ENST00000384564 100 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 Y_RNA.561-201ENST00000384694 100 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CTDNEP1O95476 RNU1-78P-201ENST00000391248 165 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CTDNEP1O95476 NCOR1P3-201ENST00000420479 303 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.21□□□□□ -2.22
CTDNEP1O95476 AC007395.1-201ENST00000451333 677 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 MTND4P17-201ENST00000470444 350 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 AC067942.3-201ENST00000512025 362 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 RNA5SP384-201ENST00000516615 116 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 RNU6-856P-201ENST00000516959 98 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 RNU1-54P-201ENST00000517181 120 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.21□□□□□ -2.22
CTDNEP1O95476 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.21□□□□□ -2.22
CTDNEP1O95476 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.21□□□□□ -2.22
CTDNEP1O95476 AC005786.1-201ENST00000588553 154 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 AC016727.1-205ENST00000605437 569 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 AC005014.2-201ENST00000607795 599 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 AC137590.2-201ENST00000619709 240 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 MTND4P12-201ENST00000498999 1377 ntBASIC1.21□□□□□ -2.22
CTDNEP1O95476 AL159152.1-201ENST00000635019 2587 ntBASIC1.2□□□□□ -2.22
CTDNEP1O95476 RNU6-874P-201ENST00000362390 105 ntBASIC1.2□□□□□ -2.22
CTDNEP1O95476 RNU6-873P-201ENST00000363833 107 ntBASIC1.2□□□□□ -2.22
CTDNEP1O95476 Y_RNA.319-201ENST00000365138 92 ntBASIC1.2□□□□□ -2.22
CTDNEP1O95476 SNORD81.2-201ENST00000365153 76 ntBASIC1.2□□□□□ -2.22
CTDNEP1O95476 RNU6-296P-201ENST00000384608 107 ntBASIC1.2□□□□□ -2.22
CTDNEP1O95476 RNU6-876P-201ENST00000391295 104 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms