Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SNORD13-201ENST00000459299 104 ntBASIC2.05□□□□□ -2.08
MBD4O95243 RNU6-221P-201ENST00000459541 99 ntBASIC2.05□□□□□ -2.08
MBD4O95243 PRDX4P1-201ENST00000507189 574 ntBASIC2.05□□□□□ -2.08
MBD4O95243 AC093303.1-201ENST00000514549 295 ntBASIC2.05□□□□□ -2.08
MBD4O95243 Y_RNA.691-201ENST00000516611 103 ntBASIC2.05□□□□□ -2.08
MBD4O95243 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.05□□□□□ -2.08
MBD4O95243 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.05□□□□□ -2.08
MBD4O95243 AC022306.2-201ENST00000617563 647 ntBASIC2.05□□□□□ -2.08
MBD4O95243 AL353997.5-201ENST00000618886 171 ntBASIC2.05□□□□□ -2.08
MBD4O95243 MIR338-201ENST00000636369 67 ntBASIC2.05□□□□□ -2.08
MBD4O95243 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
MBD4O95243 Y_RNA.184-201ENST00000363884 108 ntBASIC2.04□□□□□ -2.08
MBD4O95243 SNORA72.2-201ENST00000365028 127 ntBASIC2.04□□□□□ -2.08
MBD4O95243 Y_RNA.473-201ENST00000384333 102 ntBASIC2.04□□□□□ -2.08
MBD4O95243 RNU6-296P-201ENST00000384608 107 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.04□□□□□ -2.08
MBD4O95243 MTCYBP10-201ENST00000424905 650 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AL445305.1-201ENST00000432577 575 ntBASIC2.04□□□□□ -2.08
MBD4O95243 Y_RNA.635-201ENST00000459041 101 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AC091179.3-201ENST00000474761 144 ntBASIC2.04□□□□□ -2.08
MBD4O95243 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AC103851.1-201ENST00000506833 274 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.04□□□□□ -2.08
MBD4O95243 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.04□□□□□ -2.08
MBD4O95243 MIR3198-2-201ENST00000577868 80 ntBASIC2.04□□□□□ -2.08
MBD4O95243 MIR5695-201ENST00000579717 85 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AC010615.1-201ENST00000594254 1764 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AC005014.2-201ENST00000607795 599 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AC126177.8-201ENST00000618339 1015 ntBASIC2.04□□□□□ -2.08
MBD4O95243 AC006001.4-201ENST00000622243 395 ntBASIC2.04□□□□□ -2.08
MBD4O95243 RNY1P16-201ENST00000363063 111 ntBASIC2.03□□□□□ -2.08
MBD4O95243 MIR190B-201ENST00000401119 79 ntBASIC2.03□□□□□ -2.08
MBD4O95243 MIR1253-201ENST00000408273 105 ntBASIC2.03□□□□□ -2.08
MBD4O95243 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.03□□□□□ -2.08
MBD4O95243 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.03□□□□□ -2.08
MBD4O95243 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.03□□□□□ -2.08
MBD4O95243 MTND3P10-201ENST00000450967 341 ntBASIC2.03□□□□□ -2.08
MBD4O95243 AC105029.1-201ENST00000520250 669 ntBASIC2.03□□□□□ -2.08
MBD4O95243 MIR3618-201ENST00000580330 88 ntBASIC2.03□□□□□ -2.08
MBD4O95243 AC010999.1-201ENST00000611856 324 ntBASIC2.03□□□□□ -2.08
MBD4O95243 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
MBD4O95243 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.09
MBD4O95243 RNU6-727P-201ENST00000363592 107 ntBASIC2.02□□□□□ -2.09
MBD4O95243 SNORD48-201ENST00000364953 64 ntBASIC2.02□□□□□ -2.09
MBD4O95243 Y_RNA.415-201ENST00000384012 112 ntBASIC2.02□□□□□ -2.09
MBD4O95243 PDCL2P1-201ENST00000419302 352 ntBASIC2.02□□□□□ -2.09
MBD4O95243 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.02□□□□□ -2.09
MBD4O95243 AC245047.4-201ENST00000433189 144 ntBASIC2.02□□□□□ -2.09
MBD4O95243 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.02□□□□□ -2.09
MBD4O95243 AC090617.3-201ENST00000573670 475 ntBASIC2.02□□□□□ -2.09
MBD4O95243 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.02□□□□□ -2.09
MBD4O95243 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
MBD4O95243 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.02□□□□□ -2.09
MBD4O95243 TPTEP1-208ENST00000636884 213 ntBASIC2.02□□□□□ -2.09
MBD4O95243 AC099654.14-201ENST00000638599 341 ntBASIC2.02□□□□□ -2.09
MBD4O95243 MTND5P16-201ENST00000460269 1703 ntBASIC2.01□□□□□ -2.09
MBD4O95243 Y_RNA.106-201ENST00000363189 100 ntBASIC2.01□□□□□ -2.09
MBD4O95243 Y_RNA.364-201ENST00000365532 101 ntBASIC2.01□□□□□ -2.09
MBD4O95243 MIR30A-201ENST00000385092 71 ntBASIC2.01□□□□□ -2.09
MBD4O95243 MIR548B-201ENST00000385247 97 ntBASIC2.01□□□□□ -2.09
MBD4O95243 RNU6-482P-201ENST00000391068 107 ntBASIC2.01□□□□□ -2.09
MBD4O95243 SNORA17.3-201ENST00000391159 129 ntBASIC2.01□□□□□ -2.09
MBD4O95243 RNU2-7P-201ENST00000410794 178 ntBASIC2.01□□□□□ -2.09
MBD4O95243 HMGN2P34-201ENST00000437647 269 ntBASIC2.01□□□□□ -2.09
MBD4O95243 RBMX2P4-201ENST00000441256 376 ntBASIC2.01□□□□□ -2.09
MBD4O95243 RPL7P42-201ENST00000481005 679 ntBASIC2.01□□□□□ -2.09
MBD4O95243 HMGN1P13-201ENST00000505795 138 ntBASIC2.01□□□□□ -2.09
MBD4O95243 AC025465.3-201ENST00000510570 311 ntBASIC2.01□□□□□ -2.09
MBD4O95243 AC008834.1-201ENST00000511612 175 ntBASIC2.01□□□□□ -2.09
MBD4O95243 RNU6-237P-201ENST00000515985 71 ntBASIC2.01□□□□□ -2.09
MBD4O95243 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.01□□□□□ -2.09
MBD4O95243 Y_RNA.683-201ENST00000516508 93 ntBASIC2.01□□□□□ -2.09
MBD4O95243 AC025647.1-201ENST00000517879 253 ntBASIC2.01□□□□□ -2.09
MBD4O95243 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.01□□□□□ -2.09
MBD4O95243 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.01□□□□□ -2.09
MBD4O95243 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.01□□□□□ -2.09
MBD4O95243 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MBD4O95243 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2□□□□□ -2.09
MBD4O95243 RNU6-222P-201ENST00000362438 107 ntBASIC2□□□□□ -2.09
MBD4O95243 SNORD87-201ENST00000364849 89 ntBASIC2□□□□□ -2.09
MBD4O95243 SNORD81.2-201ENST00000365153 76 ntBASIC2□□□□□ -2.09
MBD4O95243 RNU6-1240P-201ENST00000365155 104 ntBASIC2□□□□□ -2.09
MBD4O95243 SNORA75.4-201ENST00000391278 119 ntBASIC2□□□□□ -2.09
MBD4O95243 MIR1185-2-201ENST00000408687 86 ntBASIC2□□□□□ -2.09
MBD4O95243 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2□□□□□ -2.09
MBD4O95243 AL353997.1-201ENST00000432936 108 ntBASIC2□□□□□ -2.09
MBD4O95243 AC098614.3-201ENST00000438957 440 ntBASIC2□□□□□ -2.09
MBD4O95243 UBE2V1P7-201ENST00000446395 340 ntBASIC2□□□□□ -2.09
MBD4O95243 RPL36AP21-201ENST00000490372 323 ntBASIC2□□□□□ -2.09
MBD4O95243 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2□□□□□ -2.09
MBD4O95243 RNA5SP481-201ENST00000516814 122 ntBASIC2□□□□□ -2.09
MBD4O95243 AC084364.2-201ENST00000546924 395 ntBASIC2□□□□□ -2.09
MBD4O95243 AC093023.1-201ENST00000547375 507 ntBASIC2□□□□□ -2.09
MBD4O95243 MIR502-201ENST00000606349 86 ntBASIC2□□□□□ -2.09
MBD4O95243 MIR8074-201ENST00000615081 81 ntBASIC2□□□□□ -2.09
MBD4O95243 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2□□□□□ -2.09
MBD4O95243 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
MBD4O95243 SNORA63D-201ENST00000364359 132 ntBASIC1.99□□□□□ -2.09
MBD4O95243 RNU6-281P-201ENST00000384212 103 ntBASIC1.99□□□□□ -2.09
MBD4O95243 FTH1P12-201ENST00000432137 551 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms