Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.87□□□□□ -1.95
CDKL5O76039 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.87□□□□□ -1.95
CDKL5O76039 AC022441.3-201ENST00000605737 136 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.87□□□□□ -1.95
CDKL5O76039 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDKL5O76039 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDKL5O76039 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDKL5O76039 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDKL5O76039 RNU4-15P-201ENST00000362613 141 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 SNORD114-19-201ENST00000363072 75 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 Y_RNA.101-201ENST00000363154 102 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 Y_RNA.122-201ENST00000363331 96 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 Y_RNA.180-201ENST00000363867 113 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 MIR627-201ENST00000384979 97 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 PCNPP3-201ENST00000393579 471 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 Y_RNA.793-201ENST00000411222 111 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AL365496.1-201ENST00000426885 215 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AC009237.7-201ENST00000447357 229 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AL441985.1-201ENST00000457727 251 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.86□□□□□ -1.95
CDKL5O76039 AC074133.1-201ENST00000515696 183 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AP002001.1-203ENST00000534002 267 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.86□□□□□ -1.95
CDKL5O76039 AC025281.1-201ENST00000567026 265 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AC011921.3-201ENST00000605540 361 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.86□□□□□ -1.95
CDKL5O76039 PCGEM1.1-201ENST00000613431 131 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AL590240.4-201ENST00000616908 390 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.86□□□□□ -1.95
CDKL5O76039 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.86□□□□□ -1.95
CDKL5O76039 Y_RNA.136-201ENST00000363444 102 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 Y_RNA.270-201ENST00000364693 104 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 Y_RNA.292-201ENST00000364904 97 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 RNY4P28-201ENST00000365281 93 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 RNU6-514P-201ENST00000384208 107 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 RNU6-886P-201ENST00000384319 105 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 MIR186-201ENST00000384988 86 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 AL359511.1-201ENST00000402970 211 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 RNU4-61P-201ENST00000411243 107 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 Y_RNA.626-201ENST00000411288 95 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 AC004866.1-201ENST00000411748 78 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 RPL23AP36-201ENST00000413895 458 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL5O76039 CR769767.1-201ENST00000436337 346 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 AC108938.1-201ENST00000451204 136 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 AC005042.3-201ENST00000453230 174 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 AC112771.1-201ENST00000463581 102 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 RNA5SP82-201ENST00000516707 92 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 RNU1-104P-201ENST00000517280 175 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL5O76039 DEFB131C-201ENST00000528817 165 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.85□□□□□ -1.95
CDKL5O76039 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL5O76039 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL5O76039 MIR6817-201ENST00000615588 66 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 AC091932.3-201ENST00000624223 323 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.85□□□□□ -1.95
CDKL5O76039 MAPK10-266ENST00000641066 6555 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.84□□□□□ -1.95
CDKL5O76039 UBE2WP1-201ENST00000362030 340 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 SNORA72.2-201ENST00000365028 127 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 Y_RNA.415-201ENST00000384012 112 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 Y_RNA.498-201ENST00000384460 102 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 MIR518C-201ENST00000384822 101 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDKL5O76039 Y_RNA.590-201ENST00000410140 107 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.84□□□□□ -1.95
CDKL5O76039 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.84□□□□□ -1.95
CDKL5O76039 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.84□□□□□ -1.95
CDKL5O76039 AL121594.1-201ENST00000475906 575 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 AC107393.1-201ENST00000512403 346 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 SNORA27.4-201ENST00000516650 95 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 CYCSP23-201ENST00000519781 313 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 MIR3145-201ENST00000580727 82 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 MIR4282-201ENST00000583613 67 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 AC004467.1-201ENST00000615678 330 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.84□□□□□ -1.95
CDKL5O76039 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.83□□□□□ -1.96
CDKL5O76039 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDKL5O76039 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDKL5O76039 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.83□□□□□ -1.96
CDKL5O76039 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDKL5O76039 RNU1-62P-201ENST00000362599 164 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 RNA5SP68-201ENST00000363885 119 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 RNU2-61P-201ENST00000411069 191 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 RNU6-1199P-201ENST00000411249 104 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.83□□□□□ -1.96
CDKL5O76039 RPS3P1-201ENST00000456781 192 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 AC145146.1-201ENST00000496370 254 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 RAC1P5-201ENST00000512182 576 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 SNORA31.11-201ENST00000516528 139 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 AP002392.1-201ENST00000537692 208 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.83□□□□□ -1.96
CDKL5O76039 SNRPGP20-201ENST00000604477 205 ntBASIC2.83□□□□□ -1.96
CDKL5O76039 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.83□□□□□ -1.96
CDKL5O76039 RNU6-655P-201ENST00000362858 107 ntBASIC2.82□□□□□ -1.96
CDKL5O76039 Y_RNA.82-201ENST00000363000 102 ntBASIC2.82□□□□□ -1.96
CDKL5O76039 Y_RNA.92-201ENST00000363043 102 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms