Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 Y_RNA.146-201ENST00000363549 102 ntBASIC2□□□□□ -2.09
GPC4O75487 RNU6-879P-201ENST00000364328 108 ntBASIC2□□□□□ -2.09
GPC4O75487 RNU2-2P-201ENST00000410396 191 ntBASIC2□□□□□ -2.09
GPC4O75487 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2□□□□□ -2.09
GPC4O75487 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2□□□□□ -2.09
GPC4O75487 AL357134.1-201ENST00000445848 426 ntBASIC2□□□□□ -2.09
GPC4O75487 CHEK2P4-201ENST00000450340 246 ntBASIC2□□□□□ -2.09
GPC4O75487 RPS29P21-201ENST00000496272 170 ntBASIC2□□□□□ -2.09
GPC4O75487 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2□□□□□ -2.09
GPC4O75487 RNU6-856P-201ENST00000516959 98 ntBASIC2□□□□□ -2.09
GPC4O75487 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2□□□□□ -2.09
GPC4O75487 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
GPC4O75487 AC116312.1-201ENST00000606841 314 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.15-201ENST00000611544 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.16-201ENST00000613119 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.12-201ENST00000613778 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.20-201ENST00000613956 192 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.9-201ENST00000615427 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.11-201ENST00000616345 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.2-201ENST00000616535 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.3-201ENST00000617785 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.19-201ENST00000618602 191 ntBASIC2□□□□□ -2.09
GPC4O75487 RNU2-1-201ENST00000618664 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.6-201ENST00000619225 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.5-201ENST00000619465 191 ntBASIC2□□□□□ -2.09
GPC4O75487 U2.10-201ENST00000620268 191 ntBASIC2□□□□□ -2.09
GPC4O75487 AL162373.1-201ENST00000620433 407 ntBASIC2□□□□□ -2.09
GPC4O75487 AC104985.2-201ENST00000620598 500 ntBASIC2□□□□□ -2.09
GPC4O75487 MTND5P10-201ENST00000603719 1809 ntBASIC2□□□□□ -2.09
GPC4O75487 AC073544.1-201ENST00000600110 1595 ntBASIC1.99□□□□□ -2.09
GPC4O75487 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
GPC4O75487 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
GPC4O75487 RNU6-1115P-201ENST00000362490 106 ntBASIC1.99□□□□□ -2.09
GPC4O75487 Y_RNA.813-201ENST00000364639 102 ntBASIC1.99□□□□□ -2.09
GPC4O75487 RNU6-1145P-201ENST00000384246 107 ntBASIC1.99□□□□□ -2.09
GPC4O75487 Y_RNA.496-201ENST00000384444 101 ntBASIC1.99□□□□□ -2.09
GPC4O75487 RNU6-1235P-201ENST00000384559 107 ntBASIC1.99□□□□□ -2.09
GPC4O75487 MIR625-201ENST00000385047 85 ntBASIC1.99□□□□□ -2.09
GPC4O75487 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
GPC4O75487 AL079342.1-201ENST00000401460 267 ntBASIC1.99□□□□□ -2.09
GPC4O75487 RNU6-57P-201ENST00000411348 103 ntBASIC1.99□□□□□ -2.09
GPC4O75487 AC114482.1-201ENST00000418010 247 ntBASIC1.99□□□□□ -2.09
GPC4O75487 AC096644.2-201ENST00000429278 159 ntBASIC1.99□□□□□ -2.09
GPC4O75487 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.99□□□□□ -2.09
GPC4O75487 RPL23AP3-201ENST00000453844 468 ntBASIC1.99□□□□□ -2.09
GPC4O75487 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
GPC4O75487 RNU6-498P-201ENST00000459468 107 ntBASIC1.99□□□□□ -2.09
GPC4O75487 RNU6-948P-201ENST00000516374 107 ntBASIC1.99□□□□□ -2.09
GPC4O75487 Y_RNA.683-201ENST00000516508 93 ntBASIC1.99□□□□□ -2.09
GPC4O75487 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.99□□□□□ -2.09
GPC4O75487 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.99□□□□□ -2.09
GPC4O75487 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.99□□□□□ -2.09
GPC4O75487 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
GPC4O75487 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
GPC4O75487 AC080078.3-201ENST00000605407 463 ntBASIC1.99□□□□□ -2.09
GPC4O75487 AC083806.3-201ENST00000614016 455 ntBASIC1.99□□□□□ -2.09
GPC4O75487 AC138305.3-201ENST00000624988 240 ntBASIC1.99□□□□□ -2.09
GPC4O75487 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.99□□□□□ -2.09
GPC4O75487 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
GPC4O75487 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
GPC4O75487 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.98□□□□□ -2.09
GPC4O75487 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
GPC4O75487 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
GPC4O75487 RNU6-1301P-201ENST00000362724 104 ntBASIC1.98□□□□□ -2.09
GPC4O75487 Y_RNA.314-201ENST00000365114 102 ntBASIC1.98□□□□□ -2.09
GPC4O75487 SNORA69.1-201ENST00000390904 137 ntBASIC1.98□□□□□ -2.09
GPC4O75487 Y_RNA.592-201ENST00000410274 109 ntBASIC1.98□□□□□ -2.09
GPC4O75487 AC099677.2-201ENST00000436385 175 ntBASIC1.98□□□□□ -2.09
GPC4O75487 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.98□□□□□ -2.09
GPC4O75487 AC027575.1-201ENST00000481064 460 ntBASIC1.98□□□□□ -2.09
GPC4O75487 RNU6-1041P-201ENST00000516254 102 ntBASIC1.98□□□□□ -2.09
GPC4O75487 AC091144.1-201ENST00000519573 138 ntBASIC1.98□□□□□ -2.09
GPC4O75487 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.98□□□□□ -2.09
GPC4O75487 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.98□□□□□ -2.09
GPC4O75487 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
GPC4O75487 Y_RNA.5-201ENST00000362334 102 ntBASIC1.97□□□□□ -2.09
GPC4O75487 ELOCP21-201ENST00000412558 336 ntBASIC1.97□□□□□ -2.09
GPC4O75487 AC016909.1-201ENST00000415916 166 ntBASIC1.97□□□□□ -2.09
GPC4O75487 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
GPC4O75487 MTND2P29-201ENST00000438595 412 ntBASIC1.97□□□□□ -2.09
GPC4O75487 AC114982.1-201ENST00000469402 321 ntBASIC1.97□□□□□ -2.09
GPC4O75487 MIR5089-201ENST00000580047 84 ntBASIC1.97□□□□□ -2.09
GPC4O75487 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.97□□□□□ -2.09
GPC4O75487 CYP2C61P-201ENST00000604072 290 ntBASIC1.97□□□□□ -2.09
GPC4O75487 AL050343.2-201ENST00000607338 280 ntBASIC1.97□□□□□ -2.09
GPC4O75487 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.97□□□□□ -2.09
GPC4O75487 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
GPC4O75487 SDR42E1P4-201ENST00000620894 481 ntBASIC1.97□□□□□ -2.09
GPC4O75487 ZNF72P-201ENST00000425869 1908 ntBASIC1.97□□□□□ -2.09
GPC4O75487 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.97□□□□□ -2.09
GPC4O75487 RNU6-862P-201ENST00000362804 105 ntBASIC1.96□□□□□ -2.1
GPC4O75487 Y_RNA.61-201ENST00000362835 102 ntBASIC1.96□□□□□ -2.1
GPC4O75487 AL117342.1-201ENST00000404861 406 ntBASIC1.96□□□□□ -2.1
GPC4O75487 MIR1261-201ENST00000408659 82 ntBASIC1.96□□□□□ -2.1
GPC4O75487 MTND4P28-201ENST00000426217 387 ntBASIC1.96□□□□□ -2.1
GPC4O75487 AL353689.1-201ENST00000438895 199 ntBASIC1.96□□□□□ -2.1
GPC4O75487 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.96□□□□□ -2.1
GPC4O75487 RNU2-34P-201ENST00000516534 121 ntBASIC1.96□□□□□ -2.1
GPC4O75487 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.96□□□□□ -2.1
GPC4O75487 AC006001.4-201ENST00000622243 395 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms