Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-191P-201ENST00000516295 94 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 RNU6-155P-201ENST00000516347 100 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 RNA5SP282-201ENST00000516355 108 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 RNU2-44P-201ENST00000516795 194 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 RNU2-12P-201ENST00000517216 168 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.39□□□□□ -1.87
VAMP4O75379 AC008739.2-201ENST00000597006 317 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 AC110079.1-202ENST00000635213 138 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAMP4O75379 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
VAMP4O75379 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VAMP4O75379 AL359854.1-201ENST00000614203 1594 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.38□□□□□ -1.87
VAMP4O75379 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAMP4O75379 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VAMP4O75379 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VAMP4O75379 Y_RNA.415-201ENST00000384012 112 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 MIR887-201ENST00000401258 79 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 SNORD88.1-201ENST00000408684 91 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 AC004866.1-201ENST00000411748 78 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 BMS1P22-201ENST00000414726 313 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 MIR5006-201ENST00000583027 110 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 MIR4635-201ENST00000583759 79 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 AC006380.1-201ENST00000603598 186 ntBASIC3.38□□□□□ -1.87
VAMP4O75379 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.37□□□□□ -1.87
VAMP4O75379 RNU6-1020P-201ENST00000363684 107 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 RNU6-682P-201ENST00000363843 106 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 RNU6-1180P-201ENST00000364935 107 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 RNU6-662P-201ENST00000384253 104 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 SNORA67.2-201ENST00000384300 149 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 FO393413.1-201ENST00000402892 195 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 EIF4EP4-201ENST00000424916 578 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.37□□□□□ -1.87
VAMP4O75379 AL392103.1-201ENST00000447000 198 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.37□□□□□ -1.87
VAMP4O75379 RPS27P26-201ENST00000494583 239 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 AP005660.1-201ENST00000522972 293 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 DEFB131C-201ENST00000528817 165 ntBASIC3.37□□□□□ -1.87
VAMP4O75379 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.37□□□□□ -1.87
VAMP4O75379 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.37□□□□□ -1.87
VAMP4O75379 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VAMP4O75379 AC007336.1-201ENST00000576365 3828 ntBASIC3.36□□□□□ -1.87
VAMP4O75379 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP4O75379 RNU6-859P-201ENST00000362728 107 ntBASIC3.36□□□□□ -1.87
VAMP4O75379 RNU4-80P-201ENST00000363200 141 ntBASIC3.36□□□□□ -1.87
VAMP4O75379 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.36□□□□□ -1.87
VAMP4O75379 COX6CP10-201ENST00000416832 224 ntBASIC3.36□□□□□ -1.87
VAMP4O75379 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.36□□□□□ -1.87
VAMP4O75379 RNA5SP385-201ENST00000515947 110 ntBASIC3.36□□□□□ -1.87
VAMP4O75379 AC010620.2-201ENST00000600135 313 ntBASIC3.36□□□□□ -1.87
VAMP4O75379 AC005828.6-201ENST00000606610 232 ntBASIC3.36□□□□□ -1.87
VAMP4O75379 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP4O75379 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP4O75379 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP4O75379 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VAMP4O75379 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.35□□□□□ -1.87
VAMP4O75379 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
VAMP4O75379 snoU2_19.1-201ENST00000362361 80 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 RNU6-454P-201ENST00000364292 107 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 SNORA18.2-201ENST00000383865 132 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 RNU6-47P-201ENST00000383866 107 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 RNU6-746P-201ENST00000384112 109 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 Y_RNA.597-201ENST00000410463 100 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 RNA5SP504-201ENST00000410676 117 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 Z98742.2-201ENST00000431564 187 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.35□□□□□ -1.87
VAMP4O75379 RPL31P41-201ENST00000477967 372 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.35□□□□□ -1.87
VAMP4O75379 AC096725.1-201ENST00000514266 313 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 MIR4506-201ENST00000584693 77 ntBASIC3.35□□□□□ -1.87
VAMP4O75379 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.35□□□□□ -1.87
VAMP4O75379 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.34□□□□□ -1.87
VAMP4O75379 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VAMP4O75379 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VAMP4O75379 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VAMP4O75379 Y_RNA.435-201ENST00000384095 112 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 RNU6-918P-201ENST00000391219 106 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 SNORA26.7-201ENST00000391288 122 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 AC009414.1-201ENST00000427200 443 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 RNU6-436P-201ENST00000516171 114 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 RNU6-107P-201ENST00000516643 102 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.34□□□□□ -1.87
VAMP4O75379 AC087441.2-201ENST00000529141 262 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 AC007536.1-201ENST00000533382 349 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 MIR3162-201ENST00000581818 82 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 snoU18.1-201ENST00000629629 71 ntBASIC3.34□□□□□ -1.87
VAMP4O75379 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
VAMP4O75379 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
VAMP4O75379 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VAMP4O75379 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.33□□□□□ -1.88
VAMP4O75379 U3.8-201ENST00000363675 217 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 SNORD32B-201ENST00000364460 84 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 RNU6-1083P-201ENST00000384022 107 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 MIR29B2-201ENST00000385055 81 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 MIR634-201ENST00000385208 97 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 U3.40-201ENST00000408706 208 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 TOMM22P2-201ENST00000430735 237 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 RNA5SP112-201ENST00000515937 99 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms