Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AL390729.2-201ENST00000416137 156 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AC097463.2-201ENST00000421074 142 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AC007395.1-201ENST00000451333 677 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.49□□□□□ -2.01
CNOT3O75175 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.49□□□□□ -2.01
CNOT3O75175 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.49□□□□□ -2.01
CNOT3O75175 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.49□□□□□ -2.01
CNOT3O75175 RNA5SP148-201ENST00000516527 94 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 RNU1-117P-201ENST00000517041 158 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AC079598.5-201ENST00000547460 117 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 EIF4A1P12-201ENST00000551910 141 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 MIR5006-201ENST00000583027 110 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.49□□□□□ -2.01
CNOT3O75175 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
CNOT3O75175 AC008749.1-201ENST00000597650 306 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AC005520.5-201ENST00000613926 164 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AC005562.2-201ENST00000618264 111 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.49□□□□□ -2.01
CNOT3O75175 Y_RNA.44-201ENST00000362676 108 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 RNU6-200P-201ENST00000364743 107 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 RNU6-301P-201ENST00000384277 107 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 RNA5SP201-201ENST00000410316 124 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 RPL23AP36-201ENST00000413895 458 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AC009963.1-201ENST00000417265 157 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.48□□□□□ -2.01
CNOT3O75175 RAB28P5-201ENST00000427490 651 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.48□□□□□ -2.01
CNOT3O75175 RN7SL429P-201ENST00000479090 223 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 RN7SL489P-201ENST00000486185 223 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 RN7SL327P-201ENST00000488659 223 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AC140059.1-201ENST00000489238 361 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AC074133.1-201ENST00000515696 183 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 CYCSP23-201ENST00000519781 313 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AC233702.2-202ENST00000562547 291 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 MIR4423-201ENST00000580922 80 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.48□□□□□ -2.01
CNOT3O75175 RN7SL853P-201ENST00000617250 223 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 AC069528.2-201ENST00000624849 1991 ntBASIC2.48□□□□□ -2.01
CNOT3O75175 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
CNOT3O75175 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
CNOT3O75175 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CNOT3O75175 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CNOT3O75175 RNU6-326P-201ENST00000365480 107 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 Y_RNA.415-201ENST00000384012 112 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 SNORA12-201ENST00000391162 147 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 AC004386.2-201ENST00000441858 148 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 MRPS10P1-201ENST00000448483 130 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
CNOT3O75175 SCARNA17.1-201ENST00000516211 143 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 RNU4-71P-201ENST00000516258 113 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 SCARNA17.2-201ENST00000516334 143 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 RNA5SP282-201ENST00000516355 108 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.47□□□□□ -2.01
CNOT3O75175 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.47□□□□□ -2.01
CNOT3O75175 AC026470.2-201ENST00000561492 181 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 AC055872.1-201ENST00000570978 278 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 AC130289.1-201ENST00000577321 73 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 AC103810.1-201ENST00000579873 453 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 RPL30P11-203ENST00000598995 310 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 SCARNA17.4-201ENST00000614296 143 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 AC127459.3-201ENST00000624328 466 ntBASIC2.47□□□□□ -2.01
CNOT3O75175 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.46□□□□□ -2.01
CNOT3O75175 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
CNOT3O75175 RNU1-62P-201ENST00000362599 164 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 SNORD87-201ENST00000364849 89 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 Y_RNA.383-201ENST00000383855 97 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 SNORA67.4-201ENST00000384688 142 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 RNA5SP475-201ENST00000410568 110 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.46□□□□□ -2.02
CNOT3O75175 AC005042.3-201ENST00000453230 174 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 RNA5SP112-201ENST00000515937 99 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 RNU6-155P-201ENST00000516347 100 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.46□□□□□ -2.02
CNOT3O75175 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.46□□□□□ -2.02
CNOT3O75175 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.46□□□□□ -2.02
CNOT3O75175 AC009779.6-201ENST00000603972 165 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.46□□□□□ -2.02
CNOT3O75175 TCL6_2.1-201ENST00000615162 119 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 AC004467.1-201ENST00000615678 330 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.46□□□□□ -2.02
CNOT3O75175 AC091932.3-201ENST00000624223 323 ntBASIC2.46□□□□□ -2.02
CNOT3O75175 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
CNOT3O75175 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CNOT3O75175 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CNOT3O75175 MIR410-201ENST00000362222 80 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 Y_RNA.297-201ENST00000364950 91 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 RNU6-1083P-201ENST00000384022 107 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 RNU6-209P-201ENST00000384118 107 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CNOT3O75175 RNU2-14P-201ENST00000411053 191 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 ELOCP21-201ENST00000412558 336 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 EIF4EP4-201ENST00000424916 578 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.45□□□□□ -2.02
CNOT3O75175 AL513328.1-201ENST00000446460 224 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 NDUFB4P10-201ENST00000452541 359 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 Y_RNA.679-201ENST00000516416 91 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 IGLV3-17-201ENST00000519099 244 ntBASIC2.45□□□□□ -2.02
CNOT3O75175 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms