Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MTATP6P17-201ENST00000431030 672 ntBASIC0.88□□□□□ -2.27
BRD4O60885 USP9YP28-201ENST00000435142 589 ntBASIC0.88□□□□□ -2.27
BRD4O60885 MTCO2P16-201ENST00000436962 677 ntBASIC0.88□□□□□ -2.27
BRD4O60885 RNU6-261P-201ENST00000459506 102 ntBASIC0.88□□□□□ -2.27
BRD4O60885 SRRM1P2-201ENST00000464531 1192 ntBASIC0.88□□□□□ -2.27
BRD4O60885 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.88□□□□□ -2.27
BRD4O60885 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.88□□□□□ -2.27
BRD4O60885 SNORA40.12-201ENST00000516329 111 ntBASIC0.88□□□□□ -2.27
BRD4O60885 RNU6-1069P-201ENST00000516612 133 ntBASIC0.88□□□□□ -2.27
BRD4O60885 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.88□□□□□ -2.27
BRD4O60885 AC104576.1-201ENST00000524225 88 ntBASIC0.88□□□□□ -2.27
BRD4O60885 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.88□□□□□ -2.27
BRD4O60885 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.88□□□□□ -2.27
BRD4O60885 AC025423.5-201ENST00000550230 219 ntBASIC0.88□□□□□ -2.27
BRD4O60885 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.88□□□□□ -2.27
BRD4O60885 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.88□□□□□ -2.27
BRD4O60885 MIR4753-201ENST00000585119 83 ntBASIC0.88□□□□□ -2.27
BRD4O60885 MZT1P2-201ENST00000604387 248 ntBASIC0.88□□□□□ -2.27
BRD4O60885 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.88□□□□□ -2.27
BRD4O60885 AL359697.1-201ENST00000624879 587 ntBASIC0.88□□□□□ -2.27
BRD4O60885 AC010615.1-201ENST00000594254 1764 ntBASIC0.88□□□□□ -2.27
BRD4O60885 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
BRD4O60885 RNU6-1019P-201ENST00000364424 107 ntBASIC0.87□□□□□ -2.27
BRD4O60885 RNU6-1317P-201ENST00000364582 104 ntBASIC0.87□□□□□ -2.27
BRD4O60885 Y_RNA.378-201ENST00000365652 113 ntBASIC0.87□□□□□ -2.27
BRD4O60885 SNORA69-201ENST00000383895 132 ntBASIC0.87□□□□□ -2.27
BRD4O60885 Y_RNA.409-201ENST00000383990 98 ntBASIC0.87□□□□□ -2.27
BRD4O60885 SNORD116-9-201ENST00000384000 95 ntBASIC0.87□□□□□ -2.27
BRD4O60885 SNORD116-3-201ENST00000384287 95 ntBASIC0.87□□□□□ -2.27
BRD4O60885 Y_RNA.471-201ENST00000384312 102 ntBASIC0.87□□□□□ -2.27
BRD4O60885 SNORD116-7-201ENST00000384404 95 ntBASIC0.87□□□□□ -2.27
BRD4O60885 SNORD116-5-201ENST00000384462 95 ntBASIC0.87□□□□□ -2.27
BRD4O60885 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
BRD4O60885 DEFB108C-201ENST00000400154 252 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.87□□□□□ -2.27
BRD4O60885 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.87□□□□□ -2.27
BRD4O60885 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.87□□□□□ -2.27
BRD4O60885 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.87□□□□□ -2.27
BRD4O60885 snoU13.6-201ENST00000458785 104 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AC083798.1-201ENST00000472671 131 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AC091133.4-201ENST00000511142 308 ntBASIC0.87□□□□□ -2.27
BRD4O60885 RNU6-1041P-201ENST00000516254 102 ntBASIC0.87□□□□□ -2.27
BRD4O60885 RNU6-948P-201ENST00000516374 107 ntBASIC0.87□□□□□ -2.27
BRD4O60885 RNA5SP481-201ENST00000516814 122 ntBASIC0.87□□□□□ -2.27
BRD4O60885 SNORD60.2-201ENST00000516883 86 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AC104383.1-201ENST00000530297 370 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AL512310.8-201ENST00000550183 120 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AL157687.1-201ENST00000554853 619 ntBASIC0.87□□□□□ -2.27
BRD4O60885 FGF7P1-201ENST00000582820 288 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AC010620.1-201ENST00000601088 1102 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AP000907.4-201ENST00000604143 237 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AP001330.5-201ENST00000607176 411 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AL121757.2-201ENST00000611223 313 ntBASIC0.87□□□□□ -2.27
BRD4O60885 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AC009509.4-201ENST00000619202 509 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AL158209.2-201ENST00000619266 216 ntBASIC0.87□□□□□ -2.27
BRD4O60885 AC073534.2-201ENST00000620377 381 ntBASIC0.87□□□□□ -2.27
BRD4O60885 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
BRD4O60885 Y_RNA.123-201ENST00000363338 102 ntBASIC0.86□□□□□ -2.27
BRD4O60885 RNU6-1085P-201ENST00000363576 107 ntBASIC0.86□□□□□ -2.27
BRD4O60885 RNU1-96P-201ENST00000364163 162 ntBASIC0.86□□□□□ -2.27
BRD4O60885 AL663109.1-201ENST00000411498 844 ntBASIC0.86□□□□□ -2.27
BRD4O60885 AL359672.1-201ENST00000442302 409 ntBASIC0.86□□□□□ -2.27
BRD4O60885 MTND3P16-201ENST00000452205 344 ntBASIC0.86□□□□□ -2.27
BRD4O60885 RPS29P27-201ENST00000463711 170 ntBASIC0.86□□□□□ -2.27
BRD4O60885 AC010531.2-201ENST00000465012 153 ntBASIC0.86□□□□□ -2.27
BRD4O60885 Y_RNA.654-201ENST00000497848 106 ntBASIC0.86□□□□□ -2.27
BRD4O60885 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.86□□□□□ -2.27
BRD4O60885 SNORA19.2-201ENST00000516013 114 ntBASIC0.86□□□□□ -2.27
BRD4O60885 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.86□□□□□ -2.27
BRD4O60885 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.86□□□□□ -2.27
BRD4O60885 MIR5006-201ENST00000583027 110 ntBASIC0.86□□□□□ -2.27
BRD4O60885 MIR3611-201ENST00000584484 83 ntBASIC0.86□□□□□ -2.27
BRD4O60885 MIR5692C1-201ENST00000585309 91 ntBASIC0.86□□□□□ -2.27
BRD4O60885 SNRPGP20-201ENST00000604477 205 ntBASIC0.86□□□□□ -2.27
BRD4O60885 AC069114.2-201ENST00000604699 304 ntBASIC0.86□□□□□ -2.27
BRD4O60885 AC009229.3-201ENST00000608056 282 ntBASIC0.86□□□□□ -2.27
BRD4O60885 TCL6_2.1-201ENST00000615162 119 ntBASIC0.86□□□□□ -2.27
BRD4O60885 AC005562.2-201ENST00000618264 111 ntBASIC0.86□□□□□ -2.27
BRD4O60885 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.86□□□□□ -2.27
BRD4O60885 MIR6863-201ENST00000636112 90 ntBASIC0.86□□□□□ -2.27
BRD4O60885 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.86□□□□□ -2.27
BRD4O60885 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
BRD4O60885 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
BRD4O60885 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
BRD4O60885 RNU6-933P-201ENST00000384424 107 ntBASIC0.85□□□□□ -2.27
BRD4O60885 EIF4E2P1-201ENST00000393781 255 ntBASIC0.85□□□□□ -2.27
BRD4O60885 MIR320B2-201ENST00000408479 138 ntBASIC0.85□□□□□ -2.27
BRD4O60885 MIR1283-1-201ENST00000408494 87 ntBASIC0.85□□□□□ -2.27
BRD4O60885 MIR1197-201ENST00000408818 88 ntBASIC0.85□□□□□ -2.27
BRD4O60885 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.85□□□□□ -2.27
BRD4O60885 MRPS10P2-201ENST00000431226 381 ntBASIC0.85□□□□□ -2.27
BRD4O60885 AC099677.2-201ENST00000436385 175 ntBASIC0.85□□□□□ -2.27
BRD4O60885 AC004386.2-201ENST00000441858 148 ntBASIC0.85□□□□□ -2.27
BRD4O60885 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.85□□□□□ -2.27
BRD4O60885 snoU13.30-201ENST00000458951 104 ntBASIC0.85□□□□□ -2.27
BRD4O60885 AC091435.1-201ENST00000505442 584 ntBASIC0.85□□□□□ -2.27
BRD4O60885 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.85□□□□□ -2.27
BRD4O60885 SCOCP1-201ENST00000554676 349 ntBASIC0.85□□□□□ -2.27
BRD4O60885 AC026470.2-201ENST00000561492 181 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms