Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.16□□□□□ -2.38
SSNA1O43805 AL136317.1-201ENST00000612653 226 ntBASIC0.16□□□□□ -2.38
SSNA1O43805 FER-210ENST00000628534 558 ntTSL 5 BASIC0.16□□□□□ -2.38
SSNA1O43805 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.15□□□□□ -2.38
SSNA1O43805 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
SSNA1O43805 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.15□□□□□ -2.39
SSNA1O43805 RNU6-392P-201ENST00000364926 101 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 RNU6-606P-201ENST00000384721 111 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 MIR216A-201ENST00000385063 110 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 MIR764-201ENST00000390811 85 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 RNU6-903P-201ENST00000391270 109 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 RNU2-9P-201ENST00000410194 145 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.15□□□□□ -2.39
SSNA1O43805 AC005178.1-201ENST00000508392 440 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 RNU6-311P-201ENST00000516224 102 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 RNU7-28P-201ENST00000516759 62 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 AC104576.1-201ENST00000524225 88 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 MTND1P35-201ENST00000526739 508 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 AC027288.2-201ENST00000553028 243 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 AC008015.1-201ENST00000555505 465 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 MIR4714-201ENST00000580728 77 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 AL391834.2-201ENST00000609982 546 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 AC068787.1-201ENST00000623908 691 ntBASIC0.15□□□□□ -2.39
SSNA1O43805 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
SSNA1O43805 AL390237.1-201ENST00000404226 1415 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 SNORA1B-201ENST00000362535 133 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 Y_RNA.140-201ENST00000363474 103 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 Y_RNA.336-201ENST00000365307 109 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 RNU6-793P-201ENST00000384233 104 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 RNU6-342P-201ENST00000384521 104 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 SNORD105-201ENST00000386910 85 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 RNU6-994P-201ENST00000410507 111 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 AL593851.1-201ENST00000426171 157 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.14□□□□□ -2.39
SSNA1O43805 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SSNA1O43805 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 HMGN2P26-201ENST00000463169 339 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.14□□□□□ -2.39
SSNA1O43805 RNU6-1116P-201ENST00000517269 99 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SSNA1O43805 AP002963.1-201ENST00000530590 184 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.14□□□□□ -2.39
SSNA1O43805 AC087683.2-201ENST00000611384 326 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 AP002371.2-201ENST00000624450 503 ntBASIC0.14□□□□□ -2.39
SSNA1O43805 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 Y_RNA.267-201ENST00000364679 109 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 RNU6-245P-201ENST00000384020 107 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 RNU6-177P-201ENST00000411257 104 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AC092473.1-201ENST00000441098 221 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 NDUFB4P10-201ENST00000452541 359 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 MTCO2P18-201ENST00000457151 658 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 SNORD65B-201ENST00000459126 73 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AC091021.1-201ENST00000468051 388 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AC010469.2-201ENST00000496412 480 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AC108210.2-201ENST00000503681 201 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AF235103.2-201ENST00000525753 346 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AC036111.3-201ENST00000526389 112 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
SSNA1O43805 SCOCP1-201ENST00000554676 349 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.13□□□□□ -2.39
SSNA1O43805 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AC004223.4-201ENST00000612426 332 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 AL008636.1-201ENST00000625038 1018 ntBASIC0.13□□□□□ -2.39
SSNA1O43805 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.12□□□□□ -2.39
SSNA1O43805 RNA5SP219-201ENST00000390940 113 ntBASIC0.12□□□□□ -2.39
SSNA1O43805 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.12□□□□□ -2.39
SSNA1O43805 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.12□□□□□ -2.39
SSNA1O43805 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.12□□□□□ -2.39
SSNA1O43805 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.12□□□□□ -2.39
SSNA1O43805 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.12□□□□□ -2.39
SSNA1O43805 AC097462.1-201ENST00000514125 324 ntBASIC0.12□□□□□ -2.39
SSNA1O43805 AP001372.4-201ENST00000524889 472 ntBASIC0.12□□□□□ -2.39
SSNA1O43805 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.12□□□□□ -2.39
SSNA1O43805 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.12□□□□□ -2.39
SSNA1O43805 MTND1P8-201ENST00000571424 950 ntBASIC0.12□□□□□ -2.39
SSNA1O43805 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.12□□□□□ -2.39
SSNA1O43805 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SSNA1O43805 Y_RNA.415-201ENST00000384012 112 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
SSNA1O43805 SNORA40.3-201ENST00000390964 122 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 RNA5SP482-201ENST00000391269 118 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 AL049545.1-201ENST00000401856 572 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 FGF7P8-201ENST00000402994 292 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 MIR1827-201ENST00000408549 66 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.11□□□□□ -2.39
SSNA1O43805 RPL23AP75-201ENST00000491601 451 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 RN7SKP164-201ENST00000516138 266 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 RNA5SP54-201ENST00000516951 92 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 AC104383.1-201ENST00000530297 370 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 AC245014.2-201ENST00000603689 287 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 AC246785.4-201ENST00000605374 287 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 AC007684.1-201ENST00000609671 477 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 AC243829.6-201ENST00000612652 106 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 AP001506.1-201ENST00000615444 211 ntBASIC0.11□□□□□ -2.39
SSNA1O43805 AC009161.2-201ENST00000624626 138 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms