Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC015720.1-201ENST00000565251 277 ntBASIC1.38□□□□□ -2.19
RIPK2O43353 AC018462.2-201ENST00000605375 395 ntBASIC1.38□□□□□ -2.19
RIPK2O43353 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.38□□□□□ -2.19
RIPK2O43353 AL078604.3-201ENST00000615580 211 ntBASIC1.38□□□□□ -2.19
RIPK2O43353 AC022306.2-201ENST00000617563 647 ntBASIC1.38□□□□□ -2.19
RIPK2O43353 AC099654.14-201ENST00000638599 341 ntBASIC1.38□□□□□ -2.19
RIPK2O43353 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
RIPK2O43353 RNU1-96P-201ENST00000364163 162 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 SNORD81.2-201ENST00000365153 76 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 RNU6-1065P-201ENST00000384513 106 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 AC138393.2-201ENST00000414742 246 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.37□□□□□ -2.19
RIPK2O43353 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.37□□□□□ -2.19
RIPK2O43353 AL135790.2-201ENST00000437701 267 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.37□□□□□ -2.19
RIPK2O43353 AC007215.1-201ENST00000464893 276 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 AC010531.2-201ENST00000465012 153 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 RPL30P10-201ENST00000488148 337 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 AC103851.1-201ENST00000506833 274 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 RNU6-1016P-201ENST00000516689 94 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.37□□□□□ -2.19
RIPK2O43353 AC084364.2-201ENST00000546924 395 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.37□□□□□ -2.19
RIPK2O43353 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
RIPK2O43353 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 MIR4524B-201ENST00000581569 115 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 AC011494.1-201ENST00000596454 237 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 AC005562.2-201ENST00000618264 111 ntBASIC1.37□□□□□ -2.19
RIPK2O43353 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RIPK2O43353 Y_RNA.88-201ENST00000363029 99 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 RNU4-9P-201ENST00000364951 139 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 MIR32-201ENST00000384965 70 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 MIR1289-2-201ENST00000408360 111 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 Y_RNA.594-201ENST00000410373 140 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 RNU4-14P-201ENST00000410858 122 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 AL161935.2-201ENST00000414627 60 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 AC007677.1-201ENST00000445757 515 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 MTCO3P8-201ENST00000453691 755 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.36□□□□□ -2.19
RIPK2O43353 snoU13.30-201ENST00000458951 104 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 MTND4P17-201ENST00000470444 350 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 HMGN1P12-201ENST00000499125 195 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 AC116353.2-201ENST00000505332 712 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 PRDX4P1-201ENST00000507189 574 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 Y_RNA.670-201ENST00000516255 105 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 Y_RNA.691-201ENST00000516611 103 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 AC015688.6-201ENST00000577737 104 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.36□□□□□ -2.19
RIPK2O43353 AL355802.3-201ENST00000607571 545 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.36□□□□□ -2.19
RIPK2O43353 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.36□□□□□ -2.19
RIPK2O43353 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.36□□□□□ -2.19
RIPK2O43353 ZNF72P-201ENST00000425869 1908 ntBASIC1.36□□□□□ -2.19
RIPK2O43353 Y_RNA.48-201ENST00000362710 103 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 SNORD115-32-201ENST00000364079 82 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 Y_RNA.303-201ENST00000364998 94 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 RNU6-203P-201ENST00000384038 104 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 MIR300-201ENST00000401138 83 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 MRPL35P1-201ENST00000404272 572 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 AC074085.1-201ENST00000413598 418 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.35□□□□□ -2.19
RIPK2O43353 AC004386.2-201ENST00000441858 148 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 AC107399.1-201ENST00000451226 265 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 snoU13.23-201ENST00000458863 104 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.35□□□□□ -2.19
RIPK2O43353 AC067942.3-201ENST00000512025 362 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.35□□□□□ -2.19
RIPK2O43353 RNU2-34P-201ENST00000516534 121 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 RNU6-856P-201ENST00000516959 98 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 CBX3P8-201ENST00000532412 525 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 AC027288.2-201ENST00000553028 243 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 AC026470.2-201ENST00000561492 181 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 AL353149.1-201ENST00000610667 244 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.35□□□□□ -2.19
RIPK2O43353 AL359697.1-201ENST00000624879 587 ntBASIC1.35□□□□□ -2.19
RIPK2O43353 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
RIPK2O43353 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
RIPK2O43353 ZNF299P-201ENST00000406845 1804 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 SNORD115-8-201ENST00000363856 82 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 RNU6-595P-201ENST00000363944 107 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 RNU6-593P-201ENST00000364716 112 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 SNORD115-38-201ENST00000365037 82 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RIPK2O43353 RNU6-601P-201ENST00000384540 107 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 MIR548B-201ENST00000385247 97 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 RPL37P10-201ENST00000412884 288 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 AL591806.2-201ENST00000433122 173 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.34□□□□□ -2.19
RIPK2O43353 MTND3P10-201ENST00000450967 341 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.34□□□□□ -2.19
RIPK2O43353 HMGN2P9-201ENST00000476875 229 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 RPL7P42-201ENST00000481005 679 ntBASIC1.34□□□□□ -2.19
RIPK2O43353 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.34□□□□□ -2.19
RIPK2O43353 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms