Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 Y_RNA.462-201ENST00000384268 102 ntBASIC2.55□□□□□ -2
PHGDHO43175 RNU6-1235P-201ENST00000384559 107 ntBASIC2.55□□□□□ -2
PHGDHO43175 MIR215-201ENST00000384858 110 ntBASIC2.55□□□□□ -2
PHGDHO43175 MIR23A-201ENST00000385245 73 ntBASIC2.55□□□□□ -2
PHGDHO43175 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
PHGDHO43175 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.55□□□□□ -2
PHGDHO43175 AC107083.1-201ENST00000439643 279 ntBASIC2.55□□□□□ -2
PHGDHO43175 AL731563.1-201ENST00000442202 214 ntBASIC2.55□□□□□ -2
PHGDHO43175 RNU6-498P-201ENST00000459468 107 ntBASIC2.55□□□□□ -2
PHGDHO43175 RN7SKP132-201ENST00000516001 208 ntBASIC2.55□□□□□ -2
PHGDHO43175 RNU2-34P-201ENST00000516534 121 ntBASIC2.55□□□□□ -2
PHGDHO43175 RNA5SP367-201ENST00000516557 118 ntBASIC2.55□□□□□ -2
PHGDHO43175 LINC02555-201ENST00000563933 1951 ntBASIC2.55□□□□□ -2
PHGDHO43175 LARP7P3-201ENST00000579888 337 ntBASIC2.55□□□□□ -2
PHGDHO43175 MIR4300-201ENST00000581016 96 ntBASIC2.55□□□□□ -2
PHGDHO43175 AL031274.2-201ENST00000599419 203 ntBASIC2.55□□□□□ -2
PHGDHO43175 AC091932.3-201ENST00000624223 323 ntBASIC2.55□□□□□ -2
PHGDHO43175 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.55□□□□□ -2
PHGDHO43175 MIR410-201ENST00000362222 80 ntBASIC2.54□□□□□ -2
PHGDHO43175 Y_RNA.193-201ENST00000363979 102 ntBASIC2.54□□□□□ -2
PHGDHO43175 RNU6-1175P-201ENST00000365200 107 ntBASIC2.54□□□□□ -2
PHGDHO43175 Y_RNA.396-201ENST00000383949 103 ntBASIC2.54□□□□□ -2
PHGDHO43175 RNU6-505P-201ENST00000384427 107 ntBASIC2.54□□□□□ -2
PHGDHO43175 Y_RNA.570-201ENST00000384750 101 ntBASIC2.54□□□□□ -2
PHGDHO43175 RNU6-713P-201ENST00000384761 107 ntBASIC2.54□□□□□ -2
PHGDHO43175 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
PHGDHO43175 RNU5A-5P-201ENST00000411054 116 ntBASIC2.54□□□□□ -2
PHGDHO43175 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.54□□□□□ -2
PHGDHO43175 AC105272.1-201ENST00000438604 198 ntBASIC2.54□□□□□ -2
PHGDHO43175 MTCO1P44-201ENST00000441935 243 ntBASIC2.54□□□□□ -2
PHGDHO43175 AL357134.1-201ENST00000445848 426 ntBASIC2.54□□□□□ -2
PHGDHO43175 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.54□□□□□ -2
PHGDHO43175 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.54□□□□□ -2
PHGDHO43175 ELOCP29-201ENST00000588193 334 ntBASIC2.54□□□□□ -2
PHGDHO43175 AC011373.1-201ENST00000607270 237 ntBASIC2.54□□□□□ -2
PHGDHO43175 MIR7106-201ENST00000612419 65 ntBASIC2.54□□□□□ -2
PHGDHO43175 MIR8062-201ENST00000621515 85 ntBASIC2.54□□□□□ -2
PHGDHO43175 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.54□□□□□ -2
PHGDHO43175 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PHGDHO43175 AL365361.1-201ENST00000566942 3481 ntBASIC2.54□□□□□ -2
PHGDHO43175 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.53□□□□□ -2
PHGDHO43175 Y_RNA.376-201ENST00000365638 108 ntBASIC2.53□□□□□ -2
PHGDHO43175 SNORD63-201ENST00000384262 68 ntBASIC2.53□□□□□ -2
PHGDHO43175 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
PHGDHO43175 MT-TW-201ENST00000387382 68 ntBASIC2.53□□□□□ -2
PHGDHO43175 RN7SKP284-201ENST00000411002 343 ntBASIC2.53□□□□□ -2
PHGDHO43175 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.53□□□□□ -2
PHGDHO43175 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.53□□□□□ -2
PHGDHO43175 RNU7-110P-201ENST00000516891 62 ntBASIC2.53□□□□□ -2
PHGDHO43175 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
PHGDHO43175 AP003733.2-201ENST00000529409 171 ntBASIC2.53□□□□□ -2
PHGDHO43175 MIR4423-201ENST00000580922 80 ntBASIC2.53□□□□□ -2
PHGDHO43175 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
PHGDHO43175 MIR3149-201ENST00000584629 83 ntBASIC2.53□□□□□ -2
PHGDHO43175 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PHGDHO43175 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
PHGDHO43175 MIR340-201ENST00000362125 95 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 Y_RNA.101-201ENST00000363154 102 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 RNU6-160P-201ENST00000384591 107 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 RNU6-21P-201ENST00000384710 107 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 SNORD115-46-201ENST00000390982 71 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 AL390729.2-201ENST00000416137 156 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 RNU6-221P-201ENST00000459541 99 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.52□□□□□ -2.01
PHGDHO43175 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
PHGDHO43175 RNU6-570P-201ENST00000517051 105 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.52□□□□□ -2.01
PHGDHO43175 AL161670.1-201ENST00000554348 137 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.52□□□□□ -2.01
PHGDHO43175 SNORD14A-201ENST00000606526 91 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.52□□□□□ -2.01
PHGDHO43175 AC006386.2-201ENST00000624491 75 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 AC012005.1-201ENST00000624575 75 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PHGDHO43175 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PHGDHO43175 AP006437.1-201ENST00000641440 3685 ntBASIC2.52□□□□□ -2.01
PHGDHO43175 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PHGDHO43175 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PHGDHO43175 AC009487.4-201ENST00000624969 3585 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.51□□□□□ -2.01
PHGDHO43175 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PHGDHO43175 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PHGDHO43175 snoU2_19.2-201ENST00000363024 80 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 SNORD113-8-201ENST00000363497 74 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 RNU6-454P-201ENST00000364292 107 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 RNU6-472P-201ENST00000384299 107 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 Y_RNA.602-201ENST00000410535 92 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 AC025465.3-201ENST00000510570 311 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 RNU6-966P-201ENST00000516479 104 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 RNA5SP137-201ENST00000516833 135 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 AC087441.2-201ENST00000529141 262 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.51□□□□□ -2.01
PHGDHO43175 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.51□□□□□ -2.01
PHGDHO43175 AC006380.1-201ENST00000603598 186 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 U4.1-201ENST00000620349 87 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 AC006001.4-201ENST00000622243 395 ntBASIC2.51□□□□□ -2.01
PHGDHO43175 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.51□□□□□ -2.01
PHGDHO43175 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms