Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 SNORA36B-201ENST00000410438 131 ntBASIC3.09□□□□□ -1.91
SHOXO15266 AL357134.1-201ENST00000445848 426 ntBASIC3.09□□□□□ -1.91
SHOXO15266 HMGN2P18-201ENST00000450680 270 ntBASIC3.09□□□□□ -1.91
SHOXO15266 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.09□□□□□ -1.91
SHOXO15266 HMGN1P18-201ENST00000457642 277 ntBASIC3.09□□□□□ -1.91
SHOXO15266 AC090515.1-201ENST00000465295 476 ntBASIC3.09□□□□□ -1.91
SHOXO15266 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.09□□□□□ -1.91
SHOXO15266 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
SHOXO15266 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
SHOXO15266 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
SHOXO15266 AC034105.4-201ENST00000568304 277 ntBASIC3.09□□□□□ -1.91
SHOXO15266 MIR4429-201ENST00000580105 73 ntBASIC3.09□□□□□ -1.91
SHOXO15266 AC008739.3-201ENST00000603262 127 ntBASIC3.09□□□□□ -1.91
SHOXO15266 AL137849.1-201ENST00000604767 169 ntBASIC3.09□□□□□ -1.91
SHOXO15266 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHOXO15266 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SHOXO15266 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SHOXO15266 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHOXO15266 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SHOXO15266 Y_RNA.215-201ENST00000364204 112 ntBASIC3.08□□□□□ -1.92
SHOXO15266 Y_RNA.229-201ENST00000364347 113 ntBASIC3.08□□□□□ -1.92
SHOXO15266 Y_RNA.291-201ENST00000364886 113 ntBASIC3.08□□□□□ -1.92
SHOXO15266 U8.7-201ENST00000364940 136 ntBASIC3.08□□□□□ -1.92
SHOXO15266 Y_RNA.337-201ENST00000365312 102 ntBASIC3.08□□□□□ -1.92
SHOXO15266 RNU6-418P-201ENST00000384035 107 ntBASIC3.08□□□□□ -1.92
SHOXO15266 MIR200C-201ENST00000384980 68 ntBASIC3.08□□□□□ -1.92
SHOXO15266 SNORA26.7-201ENST00000391288 122 ntBASIC3.08□□□□□ -1.92
SHOXO15266 AL135786.1-201ENST00000415892 214 ntBASIC3.08□□□□□ -1.92
SHOXO15266 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.08□□□□□ -1.92
SHOXO15266 AL137159.1-201ENST00000452808 512 ntBASIC3.08□□□□□ -1.92
SHOXO15266 AC245047.8-201ENST00000456455 284 ntBASIC3.08□□□□□ -1.92
SHOXO15266 AC008155.2-201ENST00000464337 397 ntBASIC3.08□□□□□ -1.92
SHOXO15266 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.08□□□□□ -1.92
SHOXO15266 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.08□□□□□ -1.92
SHOXO15266 SNORA4.4-201ENST00000515921 135 ntBASIC3.08□□□□□ -1.92
SHOXO15266 AC023632.4-201ENST00000517783 191 ntBASIC3.08□□□□□ -1.92
SHOXO15266 AC022695.1-201ENST00000522089 237 ntBASIC3.08□□□□□ -1.92
SHOXO15266 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.08□□□□□ -1.92
SHOXO15266 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.08□□□□□ -1.92
SHOXO15266 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
SHOXO15266 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.08□□□□□ -1.92
SHOXO15266 AC127455.1-201ENST00000565496 145 ntBASIC3.08□□□□□ -1.92
SHOXO15266 POLR3GP1-201ENST00000594073 261 ntBASIC3.08□□□□□ -1.92
SHOXO15266 MIR1248-201ENST00000629190 106 ntBASIC3.08□□□□□ -1.92
SHOXO15266 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SHOXO15266 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SHOXO15266 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.08□□□□□ -1.92
SHOXO15266 CENPCP1-201ENST00000533085 2578 ntBASIC3.07□□□□□ -1.92
SHOXO15266 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.07□□□□□ -1.92
SHOXO15266 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHOXO15266 SPRR2C-201ENST00000290702 219 ntBASIC3.07□□□□□ -1.92
SHOXO15266 RNU4-13P-201ENST00000364019 141 ntBASIC3.07□□□□□ -1.92
SHOXO15266 RNU6-151P-201ENST00000364158 107 ntBASIC3.07□□□□□ -1.92
SHOXO15266 RNU6-728P-201ENST00000365375 104 ntBASIC3.07□□□□□ -1.92
SHOXO15266 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
SHOXO15266 RNY3P5-201ENST00000384127 102 ntBASIC3.07□□□□□ -1.92
SHOXO15266 SNORD116-13-201ENST00000384408 92 ntBASIC3.07□□□□□ -1.92
SHOXO15266 Y_RNA.497-201ENST00000384447 98 ntBASIC3.07□□□□□ -1.92
SHOXO15266 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHOXO15266 RNA5SP317-201ENST00000410176 116 ntBASIC3.07□□□□□ -1.92
SHOXO15266 RNA5SP311-201ENST00000411290 116 ntBASIC3.07□□□□□ -1.92
SHOXO15266 AL121914.1-201ENST00000450188 156 ntBASIC3.07□□□□□ -1.92
SHOXO15266 RPL23AP54-201ENST00000495129 419 ntBASIC3.07□□□□□ -1.92
SHOXO15266 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.07□□□□□ -1.92
SHOXO15266 RNA5SP315-201ENST00000516340 116 ntBASIC3.07□□□□□ -1.92
SHOXO15266 RNA5SP312-201ENST00000517068 116 ntBASIC3.07□□□□□ -1.92
SHOXO15266 AC027419.1-201ENST00000522976 328 ntBASIC3.07□□□□□ -1.92
SHOXO15266 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.07□□□□□ -1.92
SHOXO15266 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.07□□□□□ -1.92
SHOXO15266 MIR3616-201ENST00000584070 92 ntBASIC3.07□□□□□ -1.92
SHOXO15266 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.07□□□□□ -1.92
SHOXO15266 AC091895.1-201ENST00000624494 256 ntBASIC3.07□□□□□ -1.92
SHOXO15266 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.07□□□□□ -1.92
SHOXO15266 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHOXO15266 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.06□□□□□ -1.92
SHOXO15266 AL356292.1-201ENST00000283110 373 ntBASIC3.06□□□□□ -1.92
SHOXO15266 Y_RNA.172-201ENST00000363765 102 ntBASIC3.06□□□□□ -1.92
SHOXO15266 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHOXO15266 SNORA11.2-201ENST00000408318 127 ntBASIC3.06□□□□□ -1.92
SHOXO15266 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.06□□□□□ -1.92
SHOXO15266 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
SHOXO15266 RPL23AP83-201ENST00000434984 473 ntBASIC3.06□□□□□ -1.92
SHOXO15266 AL162725.1-201ENST00000435405 301 ntBASIC3.06□□□□□ -1.92
SHOXO15266 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.06□□□□□ -1.92
SHOXO15266 RNU6-437P-201ENST00000459408 95 ntBASIC3.06□□□□□ -1.92
SHOXO15266 RPS27P22-201ENST00000478056 241 ntBASIC3.06□□□□□ -1.92
SHOXO15266 SNORD116-25-201ENST00000516517 92 ntBASIC3.06□□□□□ -1.92
SHOXO15266 RNU7-121P-201ENST00000516604 62 ntBASIC3.06□□□□□ -1.92
SHOXO15266 DNAJC19P2-201ENST00000593340 302 ntBASIC3.06□□□□□ -1.92
SHOXO15266 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.06□□□□□ -1.92
SHOXO15266 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHOXO15266 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SHOXO15266 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
SHOXO15266 SNORD21-201ENST00000383953 95 ntBASIC3.05□□□□□ -1.92
SHOXO15266 Y_RNA.568-201ENST00000384742 113 ntBASIC3.05□□□□□ -1.92
SHOXO15266 Y_RNA.572-201ENST00000384757 98 ntBASIC3.05□□□□□ -1.92
SHOXO15266 MIR181A2-201ENST00000384863 110 ntBASIC3.05□□□□□ -1.92
SHOXO15266 MIR15B-201ENST00000385045 98 ntBASIC3.05□□□□□ -1.92
SHOXO15266 AL512604.1-201ENST00000404812 257 ntBASIC3.05□□□□□ -1.92
SHOXO15266 AL606845.1-201ENST00000404881 255 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms