Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TO15178 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TO15178 U3.8-201ENST00000363675 217 ntBASIC1.93□□□□□ -2.1
TO15178 Y_RNA.460-201ENST00000384255 102 ntBASIC1.93□□□□□ -2.1
TO15178 RNU6-1235P-201ENST00000384559 107 ntBASIC1.93□□□□□ -2.1
TO15178 RNA5SP504-201ENST00000410676 117 ntBASIC1.93□□□□□ -2.1
TO15178 RNU6-1001P-201ENST00000411265 100 ntBASIC1.93□□□□□ -2.1
TO15178 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
TO15178 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.93□□□□□ -2.1
TO15178 MTND4P28-201ENST00000426217 387 ntBASIC1.93□□□□□ -2.1
TO15178 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.93□□□□□ -2.1
TO15178 HMGN2P3-201ENST00000433603 273 ntBASIC1.93□□□□□ -2.1
TO15178 HMGN2P5-201ENST00000436882 273 ntBASIC1.93□□□□□ -2.1
TO15178 U8.22-201ENST00000459141 133 ntBASIC1.93□□□□□ -2.1
TO15178 RNU6-498P-201ENST00000459468 107 ntBASIC1.93□□□□□ -2.1
TO15178 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.93□□□□□ -2.1
TO15178 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TO15178 RNU6-1115P-201ENST00000362490 106 ntBASIC1.92□□□□□ -2.1
TO15178 Y_RNA.197-201ENST00000364004 102 ntBASIC1.92□□□□□ -2.1
TO15178 SNORD87-201ENST00000364849 89 ntBASIC1.92□□□□□ -2.1
TO15178 Y_RNA.415-201ENST00000384012 112 ntBASIC1.92□□□□□ -2.1
TO15178 RNU6-1145P-201ENST00000384246 107 ntBASIC1.92□□□□□ -2.1
TO15178 SNORA64-201ENST00000384674 134 ntBASIC1.92□□□□□ -2.1
TO15178 MIR329-1-201ENST00000385028 80 ntBASIC1.92□□□□□ -2.1
TO15178 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
TO15178 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.92□□□□□ -2.1
TO15178 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.92□□□□□ -2.1
TO15178 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
TO15178 RN7SKP49-201ENST00000516675 260 ntBASIC1.92□□□□□ -2.1
TO15178 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
TO15178 RNU6-856P-201ENST00000516959 98 ntBASIC1.92□□□□□ -2.1
TO15178 MIR3169-201ENST00000578032 83 ntBASIC1.92□□□□□ -2.1
TO15178 MIR4648-201ENST00000580107 72 ntBASIC1.92□□□□□ -2.1
TO15178 AL050343.2-201ENST00000607338 280 ntBASIC1.92□□□□□ -2.1
TO15178 AC013412.1-201ENST00000610687 192 ntBASIC1.92□□□□□ -2.1
TO15178 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.92□□□□□ -2.1
TO15178 AC090574.1-201ENST00000623186 233 ntBASIC1.92□□□□□ -2.1
TO15178 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.92□□□□□ -2.1
TO15178 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
TO15178 AL159152.1-201ENST00000635019 2587 ntBASIC1.91□□□□□ -2.1
TO15178 RNU6-1301P-201ENST00000362724 104 ntBASIC1.91□□□□□ -2.1
TO15178 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
TO15178 SNORA70B-201ENST00000384210 135 ntBASIC1.91□□□□□ -2.1
TO15178 MIR597-201ENST00000384968 97 ntBASIC1.91□□□□□ -2.1
TO15178 MIR548B-201ENST00000385247 97 ntBASIC1.91□□□□□ -2.1
TO15178 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
TO15178 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
TO15178 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.91□□□□□ -2.1
TO15178 MTND2P29-201ENST00000438595 412 ntBASIC1.91□□□□□ -2.1
TO15178 AC016717.1-201ENST00000448918 286 ntBASIC1.91□□□□□ -2.1
TO15178 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.91□□□□□ -2.1
TO15178 RNU7-169P-201ENST00000459456 61 ntBASIC1.91□□□□□ -2.1
TO15178 RN7SL429P-201ENST00000479090 223 ntBASIC1.91□□□□□ -2.1
TO15178 RN7SL489P-201ENST00000486185 223 ntBASIC1.91□□□□□ -2.1
TO15178 RN7SL327P-201ENST00000488659 223 ntBASIC1.91□□□□□ -2.1
TO15178 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.91□□□□□ -2.1
TO15178 RNU1-41P-201ENST00000516161 162 ntBASIC1.91□□□□□ -2.1
TO15178 RNU1-48P-201ENST00000516400 162 ntBASIC1.91□□□□□ -2.1
TO15178 RNU6-911P-201ENST00000516523 104 ntBASIC1.91□□□□□ -2.1
TO15178 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
TO15178 AL080274.1-201ENST00000605565 220 ntBASIC1.91□□□□□ -2.1
TO15178 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.91□□□□□ -2.1
TO15178 RN7SL853P-201ENST00000617250 223 ntBASIC1.91□□□□□ -2.1
TO15178 U1.36-201ENST00000620684 176 ntBASIC1.91□□□□□ -2.1
TO15178 snoZ196.1-201ENST00000625269 89 ntBASIC1.91□□□□□ -2.1
TO15178 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.91□□□□□ -2.1
TO15178 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
TO15178 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.9□□□□□ -2.1
TO15178 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.9□□□□□ -2.1
TO15178 MTND4P29-201ENST00000503122 1372 ntBASIC1.9□□□□□ -2.11
TO15178 RNA5SP361-201ENST00000362686 118 ntBASIC1.9□□□□□ -2.11
TO15178 U8.2-201ENST00000363156 134 ntBASIC1.9□□□□□ -2.11
TO15178 Y_RNA.252-201ENST00000364556 101 ntBASIC1.9□□□□□ -2.11
TO15178 RNU4-42P-201ENST00000364738 142 ntBASIC1.9□□□□□ -2.11
TO15178 Y_RNA.419-201ENST00000384041 102 ntBASIC1.9□□□□□ -2.11
TO15178 Y_RNA.535-201ENST00000384612 99 ntBASIC1.9□□□□□ -2.11
TO15178 MIR628-201ENST00000385229 95 ntBASIC1.9□□□□□ -2.11
TO15178 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
TO15178 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
TO15178 PCNPP5-201ENST00000452246 481 ntBASIC1.9□□□□□ -2.11
TO15178 TRBV12-1-201ENST00000479785 344 ntBASIC1.9□□□□□ -2.11
TO15178 HMGN1P13-201ENST00000505795 138 ntBASIC1.9□□□□□ -2.11
TO15178 Y_RNA.661-201ENST00000516003 99 ntBASIC1.9□□□□□ -2.11
TO15178 SUMO2P18-201ENST00000518873 252 ntBASIC1.9□□□□□ -2.11
TO15178 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.9□□□□□ -2.11
TO15178 MIR3945-201ENST00000581853 98 ntBASIC1.9□□□□□ -2.11
TO15178 AC005786.1-201ENST00000588553 154 ntBASIC1.9□□□□□ -2.11
TO15178 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.9□□□□□ -2.11
TO15178 AC083806.3-201ENST00000614016 455 ntBASIC1.9□□□□□ -2.11
TO15178 U2.1-201ENST00000618978 145 ntBASIC1.9□□□□□ -2.11
TO15178 AL160413.1-201ENST00000622780 310 ntBASIC1.9□□□□□ -2.11
TO15178 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TO15178 RNU1-115P-201ENST00000365329 160 ntBASIC1.89□□□□□ -2.11
TO15178 SNORA67.3-201ENST00000384366 140 ntBASIC1.89□□□□□ -2.11
TO15178 RNA5SP212-201ENST00000391223 107 ntBASIC1.89□□□□□ -2.11
TO15178 RNU6-57P-201ENST00000411348 103 ntBASIC1.89□□□□□ -2.11
TO15178 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.89□□□□□ -2.11
TO15178 AC007677.1-201ENST00000445757 515 ntBASIC1.89□□□□□ -2.11
TO15178 UQCRBP2-201ENST00000447827 297 ntBASIC1.89□□□□□ -2.11
TO15178 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms