Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNY1P10-201ENST00000363268 113 ntBASIC0.86□□□□□ -2.27
LSM1O15116 SNORD113-7-201ENST00000363762 77 ntBASIC0.86□□□□□ -2.27
LSM1O15116 SNORD115-32-201ENST00000364079 82 ntBASIC0.86□□□□□ -2.27
LSM1O15116 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.86□□□□□ -2.27
LSM1O15116 RNU6-214P-201ENST00000384130 107 ntBASIC0.86□□□□□ -2.27
LSM1O15116 MIR521-1-201ENST00000384902 87 ntBASIC0.86□□□□□ -2.27
LSM1O15116 RNU6-910P-201ENST00000390844 107 ntBASIC0.86□□□□□ -2.27
LSM1O15116 EIF4E2P1-201ENST00000393781 255 ntBASIC0.86□□□□□ -2.27
LSM1O15116 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.86□□□□□ -2.27
LSM1O15116 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.86□□□□□ -2.27
LSM1O15116 MRPS10P2-201ENST00000431226 381 ntBASIC0.86□□□□□ -2.27
LSM1O15116 AC245047.7-201ENST00000440265 293 ntBASIC0.86□□□□□ -2.27
LSM1O15116 RNU6-261P-201ENST00000459506 102 ntBASIC0.86□□□□□ -2.27
LSM1O15116 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.86□□□□□ -2.27
LSM1O15116 RNA5SP401-201ENST00000515920 127 ntBASIC0.86□□□□□ -2.27
LSM1O15116 SNORD79.1-201ENST00000516069 84 ntBASIC0.86□□□□□ -2.27
LSM1O15116 RNU1-117P-201ENST00000517041 158 ntBASIC0.86□□□□□ -2.27
LSM1O15116 AC073648.5-201ENST00000603502 305 ntBASIC0.86□□□□□ -2.27
LSM1O15116 GHRLOS.1-201ENST00000610995 70 ntBASIC0.86□□□□□ -2.27
LSM1O15116 AC073114.1-201ENST00000612027 490 ntBASIC0.86□□□□□ -2.27
LSM1O15116 AC073349.3-201ENST00000617616 186 ntBASIC0.86□□□□□ -2.27
LSM1O15116 U3.8-201ENST00000363675 217 ntBASIC0.85□□□□□ -2.27
LSM1O15116 RNU6-522P-201ENST00000364497 107 ntBASIC0.85□□□□□ -2.27
LSM1O15116 RNU4-66P-201ENST00000365199 138 ntBASIC0.85□□□□□ -2.27
LSM1O15116 AL034345.1-201ENST00000407768 123 ntBASIC0.85□□□□□ -2.27
LSM1O15116 AC002429.1-201ENST00000437672 148 ntBASIC0.85□□□□□ -2.27
LSM1O15116 AL603825.1-201ENST00000438481 80 ntBASIC0.85□□□□□ -2.27
LSM1O15116 COX6CP14-201ENST00000469580 174 ntBASIC0.85□□□□□ -2.27
LSM1O15116 AC105758.1-201ENST00000506038 399 ntBASIC0.85□□□□□ -2.27
LSM1O15116 RNA5SP168-201ENST00000516642 112 ntBASIC0.85□□□□□ -2.27
LSM1O15116 RNU6-922P-201ENST00000516753 99 ntBASIC0.85□□□□□ -2.27
LSM1O15116 RNU6-835P-201ENST00000516974 104 ntBASIC0.85□□□□□ -2.27
LSM1O15116 AC016957.1-201ENST00000534895 309 ntBASIC0.85□□□□□ -2.27
LSM1O15116 AL137100.2-201ENST00000555786 315 ntBASIC0.85□□□□□ -2.27
LSM1O15116 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.85□□□□□ -2.27
LSM1O15116 AL162424.1-201ENST00000602325 221 ntBASIC0.85□□□□□ -2.27
LSM1O15116 AC016727.1-205ENST00000605437 569 ntBASIC0.85□□□□□ -2.27
LSM1O15116 MIR6857-201ENST00000613267 93 ntBASIC0.85□□□□□ -2.27
LSM1O15116 SNORD3E-202ENST00000627253 216 ntBASIC0.85□□□□□ -2.27
LSM1O15116 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
LSM1O15116 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
LSM1O15116 RNU6-648P-201ENST00000410190 107 ntBASIC0.84□□□□□ -2.27
LSM1O15116 AC006461.1-201ENST00000412637 326 ntBASIC0.84□□□□□ -2.27
LSM1O15116 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.27
LSM1O15116 RPS3AP17-201ENST00000472594 777 ntBASIC0.84□□□□□ -2.27
LSM1O15116 AC103851.1-201ENST00000506833 274 ntBASIC0.84□□□□□ -2.27
LSM1O15116 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.84□□□□□ -2.27
LSM1O15116 RNU6-58P-201ENST00000517143 103 ntBASIC0.84□□□□□ -2.27
LSM1O15116 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.84□□□□□ -2.27
LSM1O15116 AL590705.4-201ENST00000532209 134 ntBASIC0.84□□□□□ -2.27
LSM1O15116 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.84□□□□□ -2.27
LSM1O15116 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
LSM1O15116 AC073534.2-201ENST00000620377 381 ntBASIC0.84□□□□□ -2.27
LSM1O15116 SNORD87-201ENST00000364849 89 ntBASIC0.83□□□□□ -2.28
LSM1O15116 SNORA69-201ENST00000383895 132 ntBASIC0.83□□□□□ -2.28
LSM1O15116 AF228730.1-201ENST00000397972 663 ntBASIC0.83□□□□□ -2.28
LSM1O15116 CALM2P3-201ENST00000400429 449 ntBASIC0.83□□□□□ -2.28
LSM1O15116 RNU6-1186P-201ENST00000410429 97 ntBASIC0.83□□□□□ -2.28
LSM1O15116 RNU4-55P-201ENST00000410731 137 ntBASIC0.83□□□□□ -2.28
LSM1O15116 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
LSM1O15116 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.83□□□□□ -2.28
LSM1O15116 MTND3P16-201ENST00000452205 344 ntBASIC0.83□□□□□ -2.28
LSM1O15116 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
LSM1O15116 RPS26P48-201ENST00000491713 339 ntBASIC0.83□□□□□ -2.28
LSM1O15116 RNU6-1053P-201ENST00000515930 101 ntBASIC0.83□□□□□ -2.28
LSM1O15116 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.83□□□□□ -2.28
LSM1O15116 AC027288.2-201ENST00000553028 243 ntBASIC0.83□□□□□ -2.28
LSM1O15116 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
LSM1O15116 AL158209.2-201ENST00000619266 216 ntBASIC0.83□□□□□ -2.28
LSM1O15116 AC106754.2-201ENST00000623006 233 ntBASIC0.83□□□□□ -2.28
LSM1O15116 MTND4P12-201ENST00000498999 1377 ntBASIC0.83□□□□□ -2.28
LSM1O15116 MIR337-201ENST00000362281 93 ntBASIC0.82□□□□□ -2.28
LSM1O15116 RNU6-137P-201ENST00000363680 108 ntBASIC0.82□□□□□ -2.28
LSM1O15116 RNU4-76P-201ENST00000364509 141 ntBASIC0.82□□□□□ -2.28
LSM1O15116 Y_RNA.296-201ENST00000364930 108 ntBASIC0.82□□□□□ -2.28
LSM1O15116 Y_RNA.338-201ENST00000365320 114 ntBASIC0.82□□□□□ -2.28
LSM1O15116 Y_RNA.582-201ENST00000391023 95 ntBASIC0.82□□□□□ -2.28
LSM1O15116 RNU6-321P-201ENST00000410912 106 ntBASIC0.82□□□□□ -2.28
LSM1O15116 Z82188.1-201ENST00000436709 154 ntBASIC0.82□□□□□ -2.28
LSM1O15116 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.82□□□□□ -2.28
LSM1O15116 RNU7-187P-201ENST00000458985 68 ntBASIC0.82□□□□□ -2.28
LSM1O15116 RNU7-94P-201ENST00000459576 63 ntBASIC0.82□□□□□ -2.28
LSM1O15116 BET1P1-201ENST00000482276 359 ntBASIC0.82□□□□□ -2.28
LSM1O15116 HMGN1P7-201ENST00000491722 313 ntBASIC0.82□□□□□ -2.28
LSM1O15116 AC005840.1-201ENST00000498412 377 ntBASIC0.82□□□□□ -2.28
LSM1O15116 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
LSM1O15116 RNU6-1332P-201ENST00000516666 104 ntBASIC0.82□□□□□ -2.28
LSM1O15116 AC090049.2-201ENST00000550377 109 ntBASIC0.82□□□□□ -2.28
LSM1O15116 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.82□□□□□ -2.28
LSM1O15116 AC080078.2-201ENST00000603766 501 ntBASIC0.82□□□□□ -2.28
LSM1O15116 AC121247.2-201ENST00000604776 136 ntBASIC0.82□□□□□ -2.28
LSM1O15116 Y_RNA.100-201ENST00000363141 102 ntBASIC0.81□□□□□ -2.28
LSM1O15116 Y_RNA.124-201ENST00000363339 93 ntBASIC0.81□□□□□ -2.28
LSM1O15116 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
LSM1O15116 RNU6-1322P-201ENST00000364309 107 ntBASIC0.81□□□□□ -2.28
LSM1O15116 RNU4-9P-201ENST00000364951 139 ntBASIC0.81□□□□□ -2.28
LSM1O15116 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
LSM1O15116 RNU6-969P-201ENST00000383900 105 ntBASIC0.81□□□□□ -2.28
LSM1O15116 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
LSM1O15116 SNORD37.1-201ENST00000390968 65 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms