Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 MTND4P18-201ENST00000447010 465 ntBASIC1.89□□□□□ -2.11
AP3D1O14617 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
AP3D1O14617 RNU7-87P-201ENST00000459343 62 ntBASIC1.89□□□□□ -2.11
AP3D1O14617 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.89□□□□□ -2.11
AP3D1O14617 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.89□□□□□ -2.11
AP3D1O14617 CYCSP23-201ENST00000519781 313 ntBASIC1.89□□□□□ -2.11
AP3D1O14617 MIR4801-201ENST00000582704 82 ntBASIC1.89□□□□□ -2.11
AP3D1O14617 AC005730.3-201ENST00000583067 366 ntBASIC1.89□□□□□ -2.11
AP3D1O14617 MIR5690-201ENST00000583739 73 ntBASIC1.89□□□□□ -2.11
AP3D1O14617 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.89□□□□□ -2.11
AP3D1O14617 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.89□□□□□ -2.11
AP3D1O14617 Y_RNA.303-201ENST00000364998 94 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 RNU6-1145P-201ENST00000384246 107 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 RNA5SP508-201ENST00000411327 119 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 EBAG9P1-201ENST00000418955 543 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 AC092423.1-201ENST00000430165 186 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 UBE2V1P7-201ENST00000446395 340 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 U8.22-201ENST00000459141 133 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 AC008834.1-201ENST00000511612 175 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 RNU6-277P-201ENST00000516272 106 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 AC091144.1-201ENST00000519573 138 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 MIR1273D-201ENST00000577266 86 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 AL590808.1-201ENST00000618696 141 ntBASIC1.88□□□□□ -2.11
AP3D1O14617 Y_RNA.358-201ENST00000365491 99 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 RN7SKP223-201ENST00000410582 62 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.87□□□□□ -2.11
AP3D1O14617 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.87□□□□□ -2.11
AP3D1O14617 TOMM22P2-201ENST00000430735 237 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 HSPE1P9-201ENST00000440046 311 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.87□□□□□ -2.11
AP3D1O14617 AC025465.3-201ENST00000510570 311 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 RNU6-559P-201ENST00000516151 98 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 AC024995.1-201ENST00000523014 93 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 IGKV3-31-201ENST00000523109 329 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 SUB1P3-201ENST00000564581 315 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.87□□□□□ -2.11
AP3D1O14617 AC025253.1-201ENST00000613623 543 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 AC064859.1-201ENST00000624741 174 ntBASIC1.87□□□□□ -2.11
AP3D1O14617 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.87□□□□□ -2.11
AP3D1O14617 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
AP3D1O14617 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
AP3D1O14617 RNU6-99P-201ENST00000364721 107 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
AP3D1O14617 RNU6-360P-201ENST00000390944 104 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 Y_RNA.595-201ENST00000410403 105 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
AP3D1O14617 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 RNA5SP481-201ENST00000516814 122 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.86□□□□□ -2.11
AP3D1O14617 HSBP1P1-201ENST00000555205 166 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 AC022432.1-201ENST00000595739 310 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 MIR1244-1-201ENST00000612829 85 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 MIR8074-201ENST00000615081 81 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 MIR1244-3-201ENST00000635744 85 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 MIR1244-2-201ENST00000636449 85 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 MIR1244-4-202ENST00000636813 85 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
AP3D1O14617 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
AP3D1O14617 RNA5SP361-201ENST00000362686 118 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 Y_RNA.577-201ENST00000384794 101 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 RNA5SP467-201ENST00000391274 118 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 RNA5SP425-201ENST00000410336 112 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.85□□□□□ -2.11
AP3D1O14617 RNU6-120P-201ENST00000516077 103 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 RN7SKP49-201ENST00000516675 260 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 FRG2DP-202ENST00000566967 323 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 MIR4513-201ENST00000581077 86 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 AC080078.3-201ENST00000605407 463 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 AL132765.2-201ENST00000610812 351 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 AL357075.2-201ENST00000614906 189 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
AP3D1O14617 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
AP3D1O14617 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
AP3D1O14617 RNU6-1266P-201ENST00000362794 105 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 RNU6-879P-201ENST00000364328 108 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 Y_RNA.387-201ENST00000383918 102 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 RNU6-890P-201ENST00000384121 107 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 RNU6-318P-201ENST00000384283 103 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 RNU6-1297P-201ENST00000384415 104 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 MTCYBP4-201ENST00000401524 249 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 ELOCP21-201ENST00000412558 336 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 Y_RNA.653-201ENST00000459091 95 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 RPL26P26-201ENST00000480251 434 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 AC091951.2-201ENST00000500762 203 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.84□□□□□ -2.11
AP3D1O14617 HMGN1P13-201ENST00000505795 138 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 AC022493.2-201ENST00000506122 481 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 RPL23AP94-201ENST00000512518 302 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 AC074133.1-201ENST00000515696 183 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 MIR2355-201ENST00000517199 87 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 AC022868.1-201ENST00000517767 391 ntBASIC1.84□□□□□ -2.11
AP3D1O14617 AC091544.4-201ENST00000555268 342 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms