Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM38O00635 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRIM38O00635 Y_RNA.8-201ENST00000362353 102 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 RNU6-1301P-201ENST00000362724 104 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 Y_RNA.81-201ENST00000362997 102 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 RNU5B-2P-201ENST00000363036 113 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 RNU6-1020P-201ENST00000363684 107 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 Y_RNA.398-201ENST00000383952 99 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 SNORA29-201ENST00000384183 140 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRIM38O00635 RNA5SP201-201ENST00000410316 124 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 RNU6-394P-201ENST00000410735 107 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 Z82209.1-201ENST00000422141 2135 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 Z82188.1-201ENST00000436709 154 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 COX6CP14-201ENST00000469580 174 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM38O00635 ANXA2P1-201ENST00000505539 926 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 AC091144.1-201ENST00000519573 138 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM38O00635 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM38O00635 AC104465.1-201ENST00000611365 139 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 AC090517.3-201ENST00000625170 141 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 SCARNA4-201ENST00000629045 128 ntBASIC2.76□□□□□ -1.97
TRIM38O00635 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRIM38O00635 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM38O00635 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM38O00635 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM38O00635 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM38O00635 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TRIM38O00635 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM38O00635 snoU2_19.1-201ENST00000362361 80 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 RNU6-222P-201ENST00000362438 107 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 RNU4-15P-201ENST00000362613 141 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 RNU4-90P-201ENST00000362773 141 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 RNU6-1290P-201ENST00000362957 109 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 RNU1-112P-201ENST00000364401 164 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 SNORD78.2-201ENST00000391076 69 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 RNU6-918P-201ENST00000391219 106 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 AL138827.1-201ENST00000402666 306 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 AL358453.1-201ENST00000422522 250 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 AC012306.1-201ENST00000423267 114 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM38O00635 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM38O00635 TOMM22P6-201ENST00000465035 409 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 AC090515.1-201ENST00000465295 476 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 Y_RNA.662-201ENST00000516028 97 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM38O00635 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM38O00635 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM38O00635 U6.106-201ENST00000636360 105 ntBASIC2.75□□□□□ -1.97
TRIM38O00635 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM38O00635 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM38O00635 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM38O00635 Y_RNA.233-201ENST00000364407 101 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 Y_RNA.240-201ENST00000364469 95 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 RNA5SP125-201ENST00000364843 120 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 RNU4-9P-201ENST00000364951 139 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 RNU6-1274P-201ENST00000384557 107 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 RNU6-1135P-201ENST00000411083 103 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 OOSP1P1-201ENST00000423265 274 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
TRIM38O00635 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM38O00635 Y_RNA.706-201ENST00000516933 99 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 MIR2355-201ENST00000517199 87 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.74□□□□□ -1.97
TRIM38O00635 MRPS18CP4-201ENST00000535821 231 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 MIR4282-201ENST00000583613 67 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 AL162424.1-201ENST00000602325 221 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 AP001485.1-201ENST00000604799 199 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM38O00635 BX322639.1-202ENST00000423987 2213 ntBASIC2.74□□□□□ -1.97
TRIM38O00635 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM38O00635 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM38O00635 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
TRIM38O00635 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM38O00635 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 SNORD115-32-201ENST00000364079 82 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 RNU1-109P-201ENST00000383960 147 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 RNU6-926P-201ENST00000384075 107 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 SNORA36A-201ENST00000384221 132 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 SNORD63-201ENST00000384262 68 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 AL033519.2-201ENST00000403958 392 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM38O00635 RNU4-30P-201ENST00000410245 143 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 RNU6-735P-201ENST00000410612 107 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM38O00635 AC005002.2-201ENST00000438228 269 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 AL353705.4-201ENST00000449661 238 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 AC145146.1-201ENST00000496370 254 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 AC074133.1-201ENST00000515696 183 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 RNU7-175P-201ENST00000515915 61 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 RNY3P16-201ENST00000516338 101 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TRIM38O00635 AC090617.3-201ENST00000573670 475 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 MIR4435-1-201ENST00000582552 80 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms