Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RNU7-128P-201ENST00000517247 62 ntBASIC0.9□□□□□ -2.27
AP3B1O00203 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.9□□□□□ -2.27
AP3B1O00203 MIR5695-201ENST00000579717 85 ntBASIC0.9□□□□□ -2.27
AP3B1O00203 AC119751.7-201ENST00000600494 245 ntBASIC0.9□□□□□ -2.27
AP3B1O00203 AL133215.3-201ENST00000609801 448 ntBASIC0.9□□□□□ -2.27
AP3B1O00203 AC073534.2-201ENST00000620377 381 ntBASIC0.9□□□□□ -2.27
AP3B1O00203 SNORD3E-202ENST00000627253 216 ntBASIC0.9□□□□□ -2.27
AP3B1O00203 SNORD50.1-201ENST00000362987 71 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 SNORD115-8-201ENST00000363856 82 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 RNU6-1322P-201ENST00000364309 107 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 RNU4-76P-201ENST00000364509 141 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 SNORD115-38-201ENST00000365037 82 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 Y_RNA.409-201ENST00000383990 98 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 RNU6-245P-201ENST00000384020 107 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 RNU6-505P-201ENST00000384427 107 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 Y_RNA.553-201ENST00000384670 102 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 MIR514A2-201ENST00000385131 88 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 MIR514A3-201ENST00000385132 88 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 SNORA12.1-201ENST00000390873 148 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 RNU6-440P-201ENST00000390882 105 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.89□□□□□ -2.27
AP3B1O00203 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.89□□□□□ -2.27
AP3B1O00203 AC105758.1-201ENST00000506038 399 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 PDCD5P2-201ENST00000507570 312 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
AP3B1O00203 AC108729.3-201ENST00000513484 108 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.89□□□□□ -2.27
AP3B1O00203 AC016957.1-201ENST00000534895 309 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 AC004584.2-201ENST00000570407 410 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.89□□□□□ -2.27
AP3B1O00203 AC121333.1-201ENST00000567488 2709 ntBASIC0.89□□□□□ -2.27
AP3B1O00203 SNORD113-7-201ENST00000363762 77 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 Y_RNA.359-201ENST00000365498 102 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
AP3B1O00203 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.88□□□□□ -2.27
AP3B1O00203 AL445305.1-201ENST00000432577 575 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 AL603825.1-201ENST00000438481 80 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 AC079354.2-201ENST00000453523 154 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 AC048334.1-201ENST00000477975 159 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 RNU6-835P-201ENST00000516974 104 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.88□□□□□ -2.27
AP3B1O00203 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.88□□□□□ -2.27
AP3B1O00203 AC026371.1-201ENST00000551867 419 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 AC063944.3-201ENST00000609969 533 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 AC073349.3-201ENST00000617616 186 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 OR4G1P-203ENST00000641984 1631 ntBASIC0.88□□□□□ -2.27
AP3B1O00203 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
AP3B1O00203 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.87□□□□□ -2.27
AP3B1O00203 MIR1185-2-201ENST00000408687 86 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 RNU6-648P-201ENST00000410190 107 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 RNU6-1186P-201ENST00000410429 97 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 AC245047.7-201ENST00000440265 293 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.87□□□□□ -2.27
AP3B1O00203 RNU7-187P-201ENST00000458985 68 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 RNU7-94P-201ENST00000459576 63 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 RNA5SP168-201ENST00000516642 112 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.87□□□□□ -2.27
AP3B1O00203 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
AP3B1O00203 AC007834.2-201ENST00000536310 343 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 AK6P2-201ENST00000549020 471 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.87□□□□□ -2.27
AP3B1O00203 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 U6.73-201ENST00000619194 103 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 AC018630.2-201ENST00000534866 2403 ntBASIC0.87□□□□□ -2.27
AP3B1O00203 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.87□□□□□ -2.27
AP3B1O00203 RNU6-522P-201ENST00000364497 107 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 SNORD87-201ENST00000364849 89 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 RNU6-1080P-201ENST00000383982 107 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 SNORD116-8-201ENST00000384365 95 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 MIR32-201ENST00000384965 70 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 MIR660-201ENST00000385235 97 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.86□□□□□ -2.27
AP3B1O00203 AC002429.1-201ENST00000437672 148 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 NDUFB4P10-201ENST00000452541 359 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 TPT1P7-201ENST00000458300 517 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 AC005840.1-201ENST00000498412 377 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.86□□□□□ -2.27
AP3B1O00203 TRMT112P2-201ENST00000512910 132 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 SNORD79.1-201ENST00000516069 84 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 RN7SKP49-201ENST00000516675 260 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 RNU6-58P-201ENST00000517143 103 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 AC090142.3-201ENST00000519012 385 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 AL137100.2-201ENST00000555786 315 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.86□□□□□ -2.27
AP3B1O00203 FRG2DP-202ENST00000566967 323 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.86□□□□□ -2.27
AP3B1O00203 AC022432.1-201ENST00000595739 310 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 AC106754.2-201ENST00000623006 233 ntBASIC0.86□□□□□ -2.27
AP3B1O00203 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
AP3B1O00203 U3.8-201ENST00000363675 217 ntBASIC0.85□□□□□ -2.27
AP3B1O00203 SNORD115-32-201ENST00000364079 82 ntBASIC0.85□□□□□ -2.27
AP3B1O00203 Y_RNA.481-201ENST00000384373 102 ntBASIC0.85□□□□□ -2.27
AP3B1O00203 RNU11-5P-201ENST00000391216 129 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms