Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MTND1P4-201ENST00000435196 415 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 MTND1P17-201ENST00000448961 204 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 AC079354.2-201ENST00000453523 154 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 MTND3P25-201ENST00000509243 135 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 MTCO3P27-201ENST00000514397 196 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR5692A1-201ENST00000580523 69 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 AC073539.2-201ENST00000597113 165 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 AL670379.3-201ENST00000605040 251 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-428P-201ENST00000362942 107 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 RNA5SP482-201ENST00000391269 118 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 CALM2P2-201ENST00000428512 440 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AC091021.1-201ENST00000468051 388 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 TRBVB-201ENST00000477100 408 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AC117522.1-201ENST00000509821 380 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR2115-201ENST00000516657 100 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 OR4H6P-202ENST00000603819 340 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AC011921.3-201ENST00000605540 361 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AC026741.1-201ENST00000605892 482 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AL139286.2-201ENST00000606838 396 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AC072039.2-201ENST00000608883 439 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AC008873.1-201ENST00000625051 138 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 AC121333.1-201ENST00000567488 2709 ntBASIC-0.76□□□□□ -2.53
CHKB-CPT1BH3BT56 ZNF204P-201ENST00000416749 2397 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 SNORA67.2-201ENST00000384300 149 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 MTND4LP11-201ENST00000422184 280 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 HMGN2P22-201ENST00000427588 175 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-63P-201ENST00000516690 95 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU2-56P-201ENST00000516826 190 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 AC090897.1-201ENST00000580909 226 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.77□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-621P-201ENST00000364752 109 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-934P-201ENST00000365154 107 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-580P-201ENST00000365159 107 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 SNORD14.1-201ENST00000365609 90 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-25P-201ENST00000383873 107 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-48P-201ENST00000384161 107 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 RNY1P14-201ENST00000384426 108 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-15P-201ENST00000384534 107 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-29P-201ENST00000384637 107 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR452-201ENST00000385020 85 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 AL603825.1-201ENST00000438481 80 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 PCNPP5-201ENST00000452246 481 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 AC026782.1-201ENST00000512952 449 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 AC103996.1-201ENST00000555468 102 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR4676-201ENST00000583078 72 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 AC108747.1-201ENST00000609508 535 ntBASIC-0.78□□□□□ -2.53
CHKB-CPT1BH3BT56 AL445523.1-201ENST00000451184 1362 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 RNU6-468P-201ENST00000384003 109 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 RNU6-769P-201ENST00000384407 104 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 RNU7-43P-201ENST00000516554 64 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 AC023050.3-201ENST00000541142 333 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 MIR4771-2-201ENST00000577758 74 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 MIR4771-1-201ENST00000582617 74 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 AC097460.3-201ENST00000623099 442 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 AL078596.1-201ENST00000624856 447 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 MIR499B-201ENST00000636498 73 ntBASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.79□□□□□ -2.54
CHKB-CPT1BH3BT56 MIR377-201ENST00000362145 69 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 RNU6-462P-201ENST00000362659 105 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 SNORA72.1-201ENST00000363485 129 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 RNU6-923P-201ENST00000364753 107 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 RNU6-187P-201ENST00000384139 106 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 AL355143.1-201ENST00000407101 841 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 RNU6-284P-201ENST00000411105 106 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 AC015818.7-201ENST00000428754 109 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 RPS24P1-201ENST00000438550 371 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 AC087499.7-201ENST00000441958 109 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 RPS29P8-201ENST00000445109 171 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 RPS29P27-201ENST00000463711 170 ntBASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.8□□□□□ -2.54
CHKB-CPT1BH3BT56 RNA5SP216-201ENST00000516111 123 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms