Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR586-201ENST00000385035 97 ntBASIC3.96□□□□□ -1.78
H3BM21 MIR1251-201ENST00000408552 70 ntBASIC3.96□□□□□ -1.78
H3BM21 SNORA57.3-201ENST00000411095 141 ntBASIC3.96□□□□□ -1.78
H3BM21 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.96□□□□□ -1.78
H3BM21 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.96□□□□□ -1.78
H3BM21 AP000873.1-201ENST00000463987 400 ntBASIC3.96□□□□□ -1.78
H3BM21 RN7SL807P-201ENST00000470923 297 ntBASIC3.96□□□□□ -1.78
H3BM21 AC025554.1-201ENST00000505641 188 ntBASIC3.96□□□□□ -1.78
H3BM21 RNA5SP20-201ENST00000515976 84 ntBASIC3.96□□□□□ -1.78
H3BM21 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.96□□□□□ -1.78
H3BM21 MIR548Z-201ENST00000584743 97 ntBASIC3.96□□□□□ -1.78
H3BM21 AC021443.1-201ENST00000604478 211 ntBASIC3.96□□□□□ -1.78
H3BM21 HSPE1P7-201ENST00000604681 321 ntBASIC3.96□□□□□ -1.78
H3BM21 AC112200.1-201ENST00000625015 234 ntBASIC3.96□□□□□ -1.78
H3BM21 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
H3BM21 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3BM21 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
H3BM21 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3BM21 RNU6-944P-201ENST00000364023 107 ntBASIC3.95□□□□□ -1.78
H3BM21 RNA5SP167-201ENST00000365461 116 ntBASIC3.95□□□□□ -1.78
H3BM21 RNY1P6-201ENST00000384193 109 ntBASIC3.95□□□□□ -1.78
H3BM21 SNORD38C-201ENST00000384381 69 ntBASIC3.95□□□□□ -1.78
H3BM21 RNU6-1104P-201ENST00000384723 104 ntBASIC3.95□□□□□ -1.78
H3BM21 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
H3BM21 SNORA11.1-201ENST00000408133 129 ntBASIC3.95□□□□□ -1.78
H3BM21 Y_RNA.620-201ENST00000411009 88 ntBASIC3.95□□□□□ -1.78
H3BM21 RNA5SP306-201ENST00000411087 107 ntBASIC3.95□□□□□ -1.78
H3BM21 MRPL35P3-201ENST00000421557 364 ntBASIC3.95□□□□□ -1.78
H3BM21 AL133547.1-201ENST00000448546 220 ntBASIC3.95□□□□□ -1.78
H3BM21 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.95□□□□□ -1.78
H3BM21 RPS27AP10-201ENST00000496103 208 ntBASIC3.95□□□□□ -1.78
H3BM21 AC107934.2-201ENST00000518653 310 ntBASIC3.95□□□□□ -1.78
H3BM21 CYCSP30-201ENST00000546447 172 ntBASIC3.95□□□□□ -1.78
H3BM21 AC008739.3-201ENST00000603262 127 ntBASIC3.95□□□□□ -1.78
H3BM21 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
H3BM21 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3BM21 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
H3BM21 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.94□□□□□ -1.78
H3BM21 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
H3BM21 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
H3BM21 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
H3BM21 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
H3BM21 SNORD61-201ENST00000384252 73 ntBASIC3.94□□□□□ -1.78
H3BM21 Y_RNA.531-201ENST00000384589 121 ntBASIC3.94□□□□□ -1.78
H3BM21 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
H3BM21 SNORD77.3-201ENST00000391113 65 ntBASIC3.94□□□□□ -1.78
H3BM21 RNA5SP354-201ENST00000391247 136 ntBASIC3.94□□□□□ -1.78
H3BM21 AL139095.1-201ENST00000404326 391 ntBASIC3.94□□□□□ -1.78
H3BM21 Y_RNA.611-201ENST00000410682 108 ntBASIC3.94□□□□□ -1.78
H3BM21 SNRPGP10-201ENST00000432323 225 ntBASIC3.94□□□□□ -1.78
H3BM21 RPS26P15-201ENST00000488067 348 ntBASIC3.94□□□□□ -1.78
H3BM21 AC145146.1-201ENST00000496370 254 ntBASIC3.94□□□□□ -1.78
H3BM21 AC010598.1-201ENST00000510378 103 ntBASIC3.94□□□□□ -1.78
H3BM21 AC027419.1-201ENST00000522976 328 ntBASIC3.94□□□□□ -1.78
H3BM21 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.94□□□□□ -1.78
H3BM21 AC022523.2-201ENST00000561045 150 ntBASIC3.94□□□□□ -1.78
H3BM21 MIR4668-201ENST00000582284 70 ntBASIC3.94□□□□□ -1.78
H3BM21 AC024220.1-201ENST00000603675 484 ntBASIC3.94□□□□□ -1.78
H3BM21 MIR6075-201ENST00000620782 95 ntBASIC3.94□□□□□ -1.78
H3BM21 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.94□□□□□ -1.78
H3BM21 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
H3BM21 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
H3BM21 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.94□□□□□ -1.78
H3BM21 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.93□□□□□ -1.78
H3BM21 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
H3BM21 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
H3BM21 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
H3BM21 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
H3BM21 MIR607-201ENST00000385241 96 ntBASIC3.93□□□□□ -1.78
H3BM21 HMGN2P10-201ENST00000448085 265 ntBASIC3.93□□□□□ -1.78
H3BM21 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.93□□□□□ -1.78
H3BM21 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.93□□□□□ -1.78
H3BM21 SNORD65B-201ENST00000459126 73 ntBASIC3.93□□□□□ -1.78
H3BM21 RNU2-11P-201ENST00000459191 187 ntBASIC3.93□□□□□ -1.78
H3BM21 PPIAP15-201ENST00000479662 484 ntBASIC3.93□□□□□ -1.78
H3BM21 YPEL5P2-201ENST00000605553 359 ntBASIC3.93□□□□□ -1.78
H3BM21 CR392039.5-201ENST00000623201 510 ntBASIC3.93□□□□□ -1.78
H3BM21 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
H3BM21 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
H3BM21 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.93□□□□□ -1.78
H3BM21 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H3BM21 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.92□□□□□ -1.78
H3BM21 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
H3BM21 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H3BM21 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H3BM21 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
H3BM21 MIR208A-201ENST00000362287 71 ntBASIC3.92□□□□□ -1.78
H3BM21 RNU6-888P-201ENST00000363010 101 ntBASIC3.92□□□□□ -1.78
H3BM21 Y_RNA.94-201ENST00000363068 106 ntBASIC3.92□□□□□ -1.78
H3BM21 RNA5SP189-201ENST00000364920 115 ntBASIC3.92□□□□□ -1.78
H3BM21 U8.17-201ENST00000391292 132 ntBASIC3.92□□□□□ -1.78
H3BM21 AL031121.1-201ENST00000406553 254 ntBASIC3.92□□□□□ -1.78
H3BM21 SNORA3C-201ENST00000408792 125 ntBASIC3.92□□□□□ -1.78
H3BM21 RNU7-164P-201ENST00000459221 62 ntBASIC3.92□□□□□ -1.78
H3BM21 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.92□□□□□ -1.78
H3BM21 RNA5SP179-201ENST00000517284 121 ntBASIC3.92□□□□□ -1.78
H3BM21 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.92□□□□□ -1.78
H3BM21 AC091152.3-201ENST00000604227 325 ntBASIC3.92□□□□□ -1.78
H3BM21 U6.73-201ENST00000619194 103 ntBASIC3.92□□□□□ -1.78
H3BM21 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms