Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MIR1248-201ENST00000629190 106 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 AC099654.10-201ENST00000640395 161 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 AC092268.1-201ENST00000342691 405 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.146-201ENST00000363549 102 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 SNORA18.2-201ENST00000383865 132 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.460-201ENST00000384255 102 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 RNY1P14-201ENST00000384426 108 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 AC078809.1-201ENST00000427601 140 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 AL137792.2-201ENST00000443484 235 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.639-201ENST00000458981 102 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 HMGB3P17-201ENST00000504195 649 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 AL590705.4-201ENST00000532209 134 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 CBX3P4-201ENST00000538909 354 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 AC044792.1-201ENST00000593294 196 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 SNORD58B-201ENST00000607313 66 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 AC090971.5-201ENST00000621102 293 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 AC138305.3-201ENST00000624988 240 ntBASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
TRIM49BA6NDI0 SNORD32B-201ENST00000364460 84 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.358-201ENST00000365491 99 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.445-201ENST00000384168 102 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 RNA5SP213-201ENST00000391031 106 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 AL627390.1-201ENST00000396055 340 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 MTCYBP6-201ENST00000441810 138 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 MTCO3P8-201ENST00000453691 755 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 snoU13.30-201ENST00000458951 104 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 RPL17P19-201ENST00000489069 552 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 AC114801.2-201ENST00000503825 781 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 AC093259.1-201ENST00000509755 300 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 RNU6-1137P-201ENST00000517073 99 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 AC021231.3-201ENST00000558497 370 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 MIR3171-201ENST00000584270 74 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 AC125232.2-201ENST00000592457 143 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 ZNF204P-201ENST00000416749 2397 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 MTND5P16-201ENST00000460269 1703 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 MTND5P10-201ENST00000603719 1809 ntBASIC1.8□□□□□ -2.12
TRIM49BA6NDI0 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU6-727P-201ENST00000363592 107 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU6-873P-201ENST00000363833 107 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.197-201ENST00000364004 102 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU6-1164P-201ENST00000364428 107 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU4-42P-201ENST00000364738 142 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.314-201ENST00000365114 102 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 SNORA22B-201ENST00000383876 138 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU6-17P-201ENST00000384245 107 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU6-18P-201ENST00000384527 107 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 MIR597-201ENST00000384968 97 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 MTCYBP2-201ENST00000407745 171 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 AL357139.1-201ENST00000407792 426 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU6-1156P-201ENST00000410365 100 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU6-1001P-201ENST00000411265 100 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RN7SKP101-201ENST00000411376 320 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 RNU4-77P-201ENST00000516692 156 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 GNAI2P1-201ENST00000541815 315 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 CYP4A27P-201ENST00000567218 190 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 AC090517.1-201ENST00000569307 266 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 MIR5695-201ENST00000579717 85 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 AC040896.1-201ENST00000613819 479 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 AL357075.2-201ENST00000614906 189 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 AP000560.1-201ENST00000624150 1937 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.79□□□□□ -2.12
TRIM49BA6NDI0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 RNU6-450P-201ENST00000364654 107 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 RNU4-9P-201ENST00000364951 139 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.319-201ENST00000365138 92 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 RNU6-142P-201ENST00000384019 107 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 RNU6-160P-201ENST00000384591 107 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.557-201ENST00000384680 107 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 MIR10B-201ENST00000385011 110 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 MIR190B-201ENST00000401119 79 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 RNA5SP504-201ENST00000410676 117 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 RPS20P15-201ENST00000412792 311 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC018865.2-201ENST00000423631 129 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 AC132942.1-201ENST00000486753 483 ntBASIC1.78□□□□□ -2.12
TRIM49BA6NDI0 RNU6-1098P-201ENST00000516772 96 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms