Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RNU6-793P-201ENST00000384233 104 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 MIR216A-201ENST00000385063 110 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 MIR1185-1-201ENST00000408598 86 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 RNU2-29P-201ENST00000410423 189 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 AC091133.4-201ENST00000511142 308 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 RNU7-28P-201ENST00000516759 62 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 RNU2-56P-201ENST00000516826 190 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 AC023157.2-201ENST00000540596 141 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 AK6P2-201ENST00000549020 471 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 HIF1AP1-201ENST00000553642 175 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 AC008015.1-201ENST00000555505 465 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 AC015712.3-201ENST00000559380 164 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 AP000942.3-201ENST00000603702 160 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 AC243829.6-201ENST00000612652 106 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 OR5AK4P-201ENST00000635912 903 ntBASIC0.1□□□□□ -2.39
TRAV12-1A0A0B4J245 SNORA25.3-201ENST00000363205 127 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-1317P-201ENST00000364582 104 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-1327P-201ENST00000365302 105 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-342P-201ENST00000384521 104 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 SNORD105-201ENST00000386910 85 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-994P-201ENST00000410507 111 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 MRPS10P1-201ENST00000448483 130 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 SNRPFP3-201ENST00000457792 225 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 U8.21-201ENST00000459536 136 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 MTND1P35-201ENST00000526739 508 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AC027288.2-201ENST00000553028 243 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AC064836.2-201ENST00000609491 462 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AC010608.3-201ENST00000625048 527 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 AL390237.1-201ENST00000404226 1415 ntBASIC0.09□□□□□ -2.4
TRAV12-1A0A0B4J245 MIR96-201ENST00000362288 78 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 SNORA1B-201ENST00000362535 133 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 Y_RNA.267-201ENST00000364679 109 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 Y_RNA.336-201ENST00000365307 109 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-1297P-201ENST00000384415 104 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-456P-201ENST00000384493 107 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-177P-201ENST00000411257 104 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 NDUFB4P10-201ENST00000452541 359 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 MTCO2P18-201ENST00000457151 658 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 AC005178.1-201ENST00000508392 440 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 AF235103.2-201ENST00000525753 346 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 AC036111.3-201ENST00000526389 112 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 AP003461.1-201ENST00000528866 78 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 AC243829.3-201ENST00000622177 108 ntBASIC0.08□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-282P-201ENST00000365357 103 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 VTRNA1-3-201ENST00000365645 89 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-245P-201ENST00000384020 107 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-606P-201ENST00000384721 111 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 RNA5SP482-201ENST00000391269 118 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-903P-201ENST00000391270 109 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 MIR1827-201ENST00000408549 66 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 SNORD65B-201ENST00000459126 73 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 HMGN2P26-201ENST00000463169 339 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 AC010469.2-201ENST00000496412 480 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 TRMT112P2-201ENST00000512910 132 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-1116P-201ENST00000517269 99 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 AP001372.4-201ENST00000524889 472 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 AC087683.2-201ENST00000611384 326 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 FER-210ENST00000628534 558 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.07□□□□□ -2.4
TRAV12-1A0A0B4J245 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 MIR103A1-201ENST00000362165 78 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU1-93P-201ENST00000364704 169 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 SNORD111-201ENST00000408139 94 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 SNORA59A-201ENST00000459326 152 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 AC091021.1-201ENST00000468051 388 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 RPL23AP75-201ENST00000491601 451 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 RNU6-341P-201ENST00000516973 96 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 AC104576.1-201ENST00000524225 88 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 AC104383.1-201ENST00000530297 370 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 AL359821.1-201ENST00000605519 182 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 snoU13.31-201ENST00000607291 104 ntBASIC0.06□□□□□ -2.4
TRAV12-1A0A0B4J245 AL391834.2-201ENST00000609982 546 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms