Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Gm43125-201ENSMUST00000201724 730 ntBASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scn5aQ9JJV9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Gm15358-201ENSMUST00000119249 520 ntBASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Gm45747-201ENSMUST00000212203 999 ntBASIC16.52■□□□□ 0.23
Scn5aQ9JJV9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn5aQ9JJV9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Gm18246-201ENSMUST00000221023 728 ntBASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.5■□□□□ 0.23
Scn5aQ9JJV9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms