Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Nkx2-4Q9EQM3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Nkx2-4Q9EQM3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nkx2-4Q9EQM3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Gm11745-201ENSMUST00000121669 448 ntBASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-4Q9EQM3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Gm8344-201ENSMUST00000119813 856 ntBASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Gm45612-201ENSMUST00000211320 160 ntBASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-4Q9EQM3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Gm9682-201ENSMUST00000197505 556 ntBASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx2-4Q9EQM3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Gm43474-201ENSMUST00000196415 774 ntBASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-4Q9EQM3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms