Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Gm36967-201ENSMUST00000193814 266 ntBASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Gm7367-201ENSMUST00000057611 492 ntBASIC16.11■□□□□ 0.17
Vps35Q9EQH3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps35Q9EQH3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps35Q9EQH3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps35Q9EQH3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.08■□□□□ 0.17
Vps35Q9EQH3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vps35Q9EQH3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps35Q9EQH3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Vps35Q9EQH3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps35Q9EQH3 Gm27357-201ENSMUST00000183754 135 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms