Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm18622-201ENSMUST00000219361 595 ntBASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx6-1Q99MA9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Gm45167-201ENSMUST00000208007 322 ntBASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx6-1Q99MA9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.02□□□□□ -0.01
Nkx6-1Q99MA9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx6-1Q99MA9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx6-1Q99MA9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx6-1Q99MA9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.02□□□□□ -0.01
Nkx6-1Q99MA9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Nkx6-1Q99MA9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Nkx6-1Q99MA9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Gm8396-201ENSMUST00000057361 823 ntBASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx6-1Q99MA9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15□□□□□ -0.01
Nkx6-1Q99MA9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Gm37171-201ENSMUST00000192636 1185 ntBASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 AC124549.3-201ENSMUST00000225541 367 ntBASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms